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UniProtKB/Swiss-Prot entry O76070


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name SYUG_HUMAN
Primary accession number O76070
Secondary accession numbers O15104 Q96P61
Integrated into Swiss-Prot on July 15, 1999
Sequence was last modified on March 21, 2006 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 79)
Name and origin of the protein
Protein name Gamma-synuclein
Synonyms Persyn
Breast cancer-specific gene 1 protein
Synoretin
SR
Gene name
Name: SNCG
Synonyms: BCSG1, PERSYN, PRSN
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Mammary cancer;
PubMed=9044857 [NCBI, ExPASy, EBI, Israel, Japan]
Ji H., Liu Y.E., Jia T., Wang M., Liu J., Xiao G., Joseph B.K., Rosen C., Shi Y.E.;
"Identification of a breast cancer-specific gene, BCSG1, by direct differential cDNA sequencing.";
Cancer Res. 57:759-764(1997).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
DOI=10.1093/hmg/7.9.1417; PubMed=9700196 [NCBI, ExPASy, EBI, Israel, Japan]
Ninkina N.N., Alimova-Kost M.V., Paterson J.W.E., Delaney L., Cohen B.B., Imreh S., Gnuchev N.V., Davies A.M., Buchman V.L.;
"Organization, expression and polymorphism of the human persyn gene.";
Hum. Mol. Genet. 7:1417-1424(1998).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANT VAL-110.
DOI=10.1007/s004390050792; PubMed=9737786 [NCBI, ExPASy, EBI, Israel, Japan]
Lavedan C., Leroy E., Dehejia A., Buchholtz S., Dutra A., Nussbaum R.L., Polymeropoulos M.H.;
"Identification, localization and characterization of the human gamma-synuclein gene.";
Hum. Genet. 103:106-112(1998).
[4]
NUCLEOTIDE SEQUENCE [MRNA].
Han C., Zhang B., Peng X., Yuan J., Qiang B.;
Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT VAL-110.
TISSUE=Colon;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[6]
PHOSPHORYLATION.
DOI=10.1074/jbc.M003542200; PubMed=10852916 [NCBI, ExPASy, EBI, Israel, Japan]
Pronin A.N., Morris A.J., Surguchov A., Benovic J.L.;
"Synucleins are a novel class of substrates for G protein-coupled receptor kinases.";
J. Biol. Chem. 275:26515-26522(2000).
[7]
SUBCELLULAR LOCATION.
DOI=10.1002/cm.1035; PubMed=11746666 [NCBI, ExPASy, EBI, Israel, Japan]
Surguchov A., Palazzo R.E., Surgucheva I.;
"Gamma synuclein: subcellular localization in neuronal and non-neuronal cells and effect on signal transduction.";
Cell Motil. Cytoskeleton 49:218-228(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF010126; AAB64109.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF037207; AAC36586.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF017256; AAC36550.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF044311; AAC27738.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF411524; AAL05870.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC014098; AAH14098.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_003078.1; -.
UniGene Hs.349470
3D structure databases
ModBase O76070.
Protein-protein interaction databases
IntAct O76070; -.
PTM databases
PhosphoSite O76070; -.
Organism-specific databases
H-InvDB HIX0008999; -.
HGNC HGNC:11141; SNCG.
GenAtlas SNCG.
HPA CAB001452; -.
HPA014404; -.
MIM 602998; gene. [NCBI / EBI]
PharmGKB PA35989; -.
GeneCards O76070.
Gene expression databases
ArrayExpress O76070; -.
CleanEx HS_SNCG; -.
GermOnline ENSG00000173267; Homo sapiens.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR001058; Synuclein.
IPR002462; Synuclein_gamma.
Graphical view of domain structure.
Gene3D G3DSA:1.10.287.700; Synuclein; 1.
PANTHER PTHR13820; Synuclein; 1.
PTHR13820:SF1; Synuclein_gamma; 1.
Pfam PF01387; Synuclein; 1.
Pfam graphical view of domain structure.
PRINTS PR01214; GSYNUCLEIN.
PR01211; SYNUCLEIN.
ProDom PD010631; Synuclein; 1.
[Domain structure / List of seq. sharing at least 1 domain]
BLOCKS O76070.
Proteomic databases
PeptideAtlas O76070; -.
Genome annotation databases
Ensembl ENSG00000173267; Homo sapiens. [Contig view]
GeneID 6623; -.
KEGG hsa:6623; -.
Phylogenomic databases
HOGENOM O76070; -.
HOVERGEN O76070; -.
Other
SOURCE SNCG; Homo sapiens.
ProtoNet O76070.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cytoplasm; Phosphoprotein; Polymorphism; Repeat.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   127  127     Gamma-synuclein. PRO_0000184038
REPEAT   20    30  11     1. 
REPEAT   31    41  11     2. 
REPEAT   42    56  15     3; approximate. 
REPEAT   57    67  11     4. 
REGION   20    67  48     4 X 11 AA tandem repeats of [EGSA]-K-T-K-[EQ]-[GQ]-V-X(4). 
MOD_RES   124   124        Phosphoserine; by BARK1, CaMK2 and CK2. 
VARIANT   110   110  1     E -> V (in dbSNP:rs9864 [NCBI]). VAR_007455 
CONFLICT   13    13        E -> K (in Ref. 1; AAB64109). 
CONFLICT   17    17        G -> D (in Ref. 4; AAL05870). 
CONFLICT   68    68        E -> K (in Ref. 1; AAB64109). 
Sequence information
Length: 127 AA [This is the length of the unprocessed precursor] Molecular weight: 13331 Da [This is the MW of the unprocessed precursor] CRC64: F183DEF302DBE688 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MDVFKKGFSI AKEGVVGAVE KTKQGVTEAA EKTKEGVMYV GAKTKENVVQ SVTSVAEKTK 

        70         80         90        100        110        120 
EQANAVSEAV VSSVNTVATK TVEEAENIAV TSGVVRKEDL RPSAPQQEGE ASKEKEEVAE 


EAQSGGD 

O76070 in FASTA format

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