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UniProtKB/Swiss-Prot entry Q9ZMP1

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name FRDB_HELPJ
Primary accession number Q9ZMP1
Secondary accession numbers None
Integrated into Swiss-Prot on January 11, 2001
Sequence was last modified on May 1, 1999 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 64)
Name and origin of the protein
Protein name Fumarate reductase iron-sulfur subunit
Synonym EC 1.3.99.1
Gene name
Name: frdB
OrderedLocusNames: jhp_0177
From
Helicobacter pylori J99 (Campylobacter pylori J99) [TaxID: 85963] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1038/16495; PubMed=9923682 [NCBI, ExPASy, EBI, Israel, Japan]
Alm R.A., Ling L.-S.L., Moir D.T., King B.L., Brown E.D., Doig P.C., Smith D.R., Noonan B., Guild B.C., deJonge B.L., Carmel G., Tummino P.J., Caruso A., Uria-Nickelsen M., Mills D.M., Ives C., Gibson R., Merberg D., Mills S.D., Jiang Q., Taylor D.E., Vovis G.F., Trust T.J.;
"Genomic sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori.";
Nature 397:176-180(1999).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE001439; AAD05761.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR F71963; F71963.
RefSeq NP_222898.1; -.
3D structure databases
HSSP P17596; 1QLA. [HSSP ENTRY / PDB]
SMR Q9ZMP1; 6-241.
ModBase Q9ZMP1.
Protein-protein interaction databases
IntAct Q9ZMP1; -.
Enzyme and pathway databases
BioCyc HPYL85963:JHP0177-MON; -.
Ontologies
GO
GO:0051537; Molecular function: 2 iron, 2 sulfur cluster binding (inferred from electronic annotation from UniProtKB-KW).
GO:0051538; Molecular function: 3 iron, 4 sulfur cluster binding (inferred from electronic annotation from UniProtKB-KW).
GO:0051539; Molecular function: 4 iron, 4 sulfur cluster binding (inferred from electronic annotation from UniProtKB-KW).
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0000104; Molecular function: succinate dehydrogenase activity (inferred from electronic annotation from EC).
GO:0022900; Biological process: electron transport chain (inferred from electronic annotation from UniProtKB-KW).
GO:0006810; Biological process: transport (inferred from electronic annotation from UniProtKB-KW).
GO:0006099; Biological process: tricarboxylic acid cycle (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR006058; 2Fe2S_fd_BS.
IPR001450; 4Fe4S_Fe_S_bd.
IPR012675; b-grasp_ferredoxin-like.
IPR001041; Ferredoxin.
IPR012285; Fum_reductase_C.
IPR004489; Succ_DHase/fum_Rdtase_Fe-S.
Graphical view of domain structure.
Gene3D G3DSA:3.10.20.30; Ferredoxin_fold; 1.
G3DSA:1.10.1060.10; Fum_reductase_C; 1.
Pfam PF00111; Fer2; 1.
PF00037; Fer4; 1.
Pfam graphical view of domain structure.
PRINTS PR00353; 4FE4SFRDOXIN.
TIGRFAMs TIGR00384; dhsB; 1.
PROSITE PS00197; 2FE2S_FER_1; 1.
PS51085; 2FE2S_FER_2; 1.
PS00198; 4FE4S_FER_1; 1.
PS51379; 4FE4S_FER_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q9ZMP1.
ProtoNet Q9ZMP1.
Genome annotation databases
GeneID 889211; -.
GenomeReviews AE001439_GR; jhp_0177.
KEGG hpj:jhp0177; -.
NMPDR fig|85963.1.peg.176; -.
Phylogenomic databases
HOGENOM Q9ZMP1; -.
Genome annotation databases
CMR Q9ZMP1; jhp_0177.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
2Fe-2S; 3Fe-4S; 4Fe-4S; Complete proteome; Electron transport; Iron; Iron-sulfur; Metal-binding; Oxidoreductase; Transport; Tricarboxylic acid cycle.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   245  245     Fumarate reductase iron-sulfur subunit. PRO_0000158704
DOMAIN   17    98  82     2Fe-2S ferredoxin-type. 
DOMAIN   145   174  30     4Fe-4S ferredoxin-type. 
METAL   60    60        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   65    65        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   68    68        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   80    80        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   154   154        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   157   157        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   160   160        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   164   164        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   211   211        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   217   217        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   221   221        Iron-sulfur 2 (4Fe-4S) (By similarity). 
Sequence information
Length: 245 AA [This is the length of the unprocessed precursor] Molecular weight: 27625 Da [This is the MW of the unprocessed precursor] CRC64: D400D302E279DB4B [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MSDNERTIVV RVLKFDPQSA VNKPHFKEYQ LKETPSMTLF IALNLIREHQ DPDLSFDFVC 

        70         80         90        100        110        120 
RAGICGSCAM MVNGRPRLAC KTLTSSFENG VITLMPMPSF TLIKDLSVNT GDWFSDMTKR 

       130        140        150        160        170        180 
VESWAHSKEE VDITKPEKRV EPDEAQEVFE LDRCIECGCC IASCGTKLMR PNFIGAAGMN 

       190        200        210        220        230        240 
RAMRFMIDSH DERSDDDFYE LVGDDDGVFG CMSLIACHDT CPKELPLQSS IATLRNRMLK 


VGKSR
Q9ZMP1 in FASTA format

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