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UniProtKB/Swiss-Prot entry Q9QY76

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name VAPB_MOUSE
Primary accession number Q9QY76
Secondary accession numbers None
Integrated into Swiss-Prot on November 1, 2002
Sequence was last modified on January 23, 2007 (Sequence version 3)
Annotations were last modified on    June 16, 2009 (Entry version 56)
Name and origin of the protein
Protein name Vesicle-associated membrane protein-associated protein B
Synonyms VAMP-associated protein B
VAMP-B
VAP-B
VAMP-associated protein 33b
Gene name
Name: Vapb
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 2: Evidence at transcript level;
References
[1]
 NUCLEOTIDE SEQUENCE [MRNA].
Tang B.L., Low D.L.H., Lock M.L., Hong W.;
"Two forms of mammalian VAP33.";
Submitted (DEC-1998) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF115504; AAF23077.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00135655; -.
UniGene Mm.260456
3D structure databases
SMR Q9QY76; 1-134.
ModBase Q9QY76.
PTM databases
PhosphoSite Q9QY76; -.
Organism-specific databases
MGI MGI:1928744; Vapb.
Gene expression databases
ArrayExpress Q9QY76; -.
Bgee Q9QY76; -.
GermOnline ENSMUSG00000054455; Mus musculus.
Ontologies
GO
GO:0012505; Cellular component: endomembrane system (inferred from electronic annotation from UniProtKB-SubCell).
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005624; Cellular component: membrane fraction (inferred from direct assay from HGNC).
GO:0005886; Cellular component: plasma membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0005198; Molecular function: structural molecule activity (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR000535; Major_sperm.
IPR008962; PapD-like.
IPR016763; Vesicle-associated_membrane.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.360; MSP; 1.
Pfam PF00635; Motile_Sperm; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF019693; VAMP-associated; 1.
PROSITE PS50202; MSP; 1.
PROSITE graphical view of domain structure (profiles).
Proteomic databases
PRIDE Q9QY76; -.
Genome annotation databases
Ensembl ENSMUSG00000054455; Mus musculus. [Contig view]
Phylogenomic databases
HOGENOM Q9QY76; -.
HOVERGEN Q9QY76; -.
Other
SOURCE Vapb; Mus musculus.
ProtoNet Q9QY76.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cell membrane; Coiled coil; Membrane; Phosphoprotein; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed (By similarity). 
CHAIN   2   243  242     Vesicle-associated membrane protein-associated protein B. PRO_0000213474
TOPO_DOM   2   218  217     Cytoplasmic (Potential). 
TRANSMEM   219   239  21     Anchor for type IV membrane protein (Potential). 
DOMAIN   7   124  118     MSP. 
COILED   161   196  36     Potential. 
MOD_RES   156   156        Phosphoserine (By similarity). 
MOD_RES   159   159        Phosphoserine (By similarity). 
MOD_RES   206   206        Phosphoserine (By similarity). 
Sequence information
Length: 243 AA [This is the length of the unprocessed precursor] Molecular weight: 26946 Da [This is the MW of the unprocessed precursor] CRC64: 9D88CBC31701C84E [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MAKVEQVLSL EPQHELKFRG PFTDVVTTNL KLGNPTDRNV CFKVKTTVPR RYCVRPNSGV 

        70         80         90        100        110        120 
IDAGASLNVS VMLQPFDYDP NEKSKHKFMV QSMFAPPDTS DMEAVWKEAK PEDLMDSKLR 

       130        140        150        160        170        180 
CVFELPAENA KPHDVEINKI IPTSASKTEA PAAAKSLTSP LDDTEVKKVM EECRRLQGEV 

       190        200        210        220        230        240 
QRLREESRQL KEEDGLRVRK AMPSNSPVAA LAATGKEEGL SARLLALVVL FFIVGVIIGK 


IAL
Q9QY76 in FASTA format

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