ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q9HBA0


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name TRPV4_HUMAN
Primary accession number Q9HBA0
Secondary accession numbers Q17R79 Q2Y122 Q2Y123 Q2Y124 Q86YZ6 Q8NDY7 Q8NG64 Q96Q92 Q96RS7 Q9HBC0
Integrated into Swiss-Prot on April 26, 2005
Sequence was last modified on April 26, 2005 (Sequence version 2)
Annotations were last modified on    June 16, 2009 (Entry version 69)
Name and origin of the protein
Protein name Transient receptor potential cation channel subfamily V member 4
Synonyms TrpV4
Osm-9-like TRP channel 4
OTRPC4
Vanilloid receptor-like channel 2
Vanilloid receptor-like protein 2
VRL-2
Vanilloid receptor-related osmotically-activated channel
VR-OAC
Transient receptor potential protein 12
TRP12
Gene name
Name: TRPV4
Synonyms: VRL2, VROAC
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
DOI=10.1016/S0092-8674(00)00143-4; PubMed=11081638 [NCBI, ExPASy, EBI, Israel, Japan]
Liedtke W.B., Choe Y., Marti-Renom M.A., Bell A.M., Denis C.S., Sali A., Hudspeth A.J., Friedman J.M., Heller S.;
"Vanilloid receptor-related osmotically activated channel (VR-OAC), a candidate vertebrate osmoreceptor.";
Cell 103:525-535(2000).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), AND FUNCTION.
TISSUE=Kidney cortex;
DOI=10.1038/35036318; PubMed=11025659 [NCBI, ExPASy, EBI, Israel, Japan]
Strotmann R., Harteneck C., Nunnenmacher K., Schultz G., Plant T.D.;
"OTRPC4, a nonselective cation channel that confers sensitivity to extracellular osmolarity.";
Nat. Cell Biol. 2:695-702(2000).
[3]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 3).
DOI=10.1074/jbc.M302561200; PubMed=12692122 [NCBI, ExPASy, EBI, Israel, Japan]
Suzuki M., Mizuno A., Kodaira K., Imai M.;
"Impaired pressure sensation in mice lacking TRPV4.";
J. Biol. Chem. 278:22664-22668(2003).
[4]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
Ishibashi K.;
"Molecular cloning of a new member of vanilloid receptor channel-like proteins.";
Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
Kelsell R.E.;
Submitted (NOV-2000) to the EMBL/GenBank/DDBJ databases.
[6]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2).
TISSUE=Aortic endothelium;
Xu F., Satoh E., Iijima T.;
Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases.
[7]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 4; 5 AND 6), SUBCELLULAR LOCATION, AND SELF-ASSOCIATION.
DOI=10.1074/jbc.M511456200; PubMed=16293632 [NCBI, ExPASy, EBI, Israel, Japan]
Arniges M., Fernandez-Fernandez J.M., Albrecht N., Schaefer M., Valverde M.A.;
"Human TRPV4 channel splice variants revealed a key role of ankyrin domains in multimerization and trafficking.";
J. Biol. Chem. 281:1580-1586(2006).
[8]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
TISSUE=Colon;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[9]
NUCLEOTIDE SEQUENCE [MRNA] OF 69-871.
Derst C., Schafer M.K.;
"Cloning of mouse and human vanilloid receptor-like protein 2 (VRL-2).";
Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases.
[10]
FUNCTION, INTERACTION WITH CALMODULIN, AND MUTAGENESIS OF 186-ARG--SER-824 AND ARG-828.
DOI=10.1074/jbc.M302590200; PubMed=12724311 [NCBI, ExPASy, EBI, Israel, Japan]
Strotmann R., Schultz G., Plant T.D.;
"Ca2+-dependent potentiation of the nonselective cation channel TRPV4 is mediated by a C-terminal calmodulin binding site.";
J. Biol. Chem. 278:26541-26549(2003).
[11]
VARIANTS BRACHYOLMNA TYPE 3 GLN-616 AND ILE-620, AND CHARACTERIZATION OF VARIANTS BRACHYOLMIA TYPE 3 GLN-616 AND ILE-620.
DOI=10.1038/ng.166; PubMed=18587396 [NCBI, ExPASy, EBI, Israel, Japan]
Rock M.J., Prenen J., Funari V.A., Funari T.L., Merriman B., Nelson S.F., Lachman R.S., Wilcox W.R., Reyno S., Quadrelli R., Vaglio A., Owsianik G., Janssens A., Voets T., Ikegawa S., Nagai T., Rimoin D.L., Nilius B., Cohn D.H.;
"Gain-of-function mutations in TRPV4 cause autosomal dominant brachyolmia.";
Nat. Genet. 40:999-1003(2008).
Comments
  • FUNCTION: Non-selective calcium permeant cation channel probably involved in osmotic sensitivity and mechanosensitivity. Activation by exposure to hypotonicity within the physiological range exhibits an outward rectification. Also activated by low pH, citrate and phorbol esters. Increase of intracellular Ca(2+) potentiates currents. Channel activity seems to be regulated by a calmodulin-dependent mechanism with a negative feedback mechanism.
  • SUBUNIT: Homotetramer (Probable). Self-associates in a isoform-specific manner. Isoforms 1/A and 5/D but not isoform 2/B, 4/C and 6/E can oligomerize. Interacts with calmodulin. Interacts with Map7 and Src family Tyr protein kinases LYN, SRC, FYN, HCK, LCK and YES (By similarity).
  • INTERACTION:
    Self; NbExp=1; IntAct=EBI-962786, EBI-962786;
    Q9HBA0-1:-; NbExp=1; IntAct=EBI-1514303, EBI-961969;
  • SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein (Probable). Note=Assembly of the putative homotetramer occurs primarily in the endoplasmic reticulum.
  • SUBCELLULAR LOCATION: Isoform 1: Cell membrane.
  • SUBCELLULAR LOCATION: Isoform 5: Cell membrane.
  • ALTERNATIVE PRODUCTS: 6 named isoforms [FASTA] produced by alternative splicing.
    Name1
    SynonymsA
    Isoform IDQ9HBA0-1
    This is the isoform sequence displayed in this entry.
    Name2
    SynonymsB, OTRPC4beta
    Isoform IDQ9HBA0-2
    Features which should be applied to build the isoform sequence: VSP_013436.
    Name3
    SynonymsTRPV-SV
    Isoform IDQ9HBA0-3
    Features which should be applied to build the isoform sequence: VSP_013437.
    Name4
    SynonymsC
    Isoform IDQ9HBA0-4
    Features which should be applied to build the isoform sequence: VSP_026615.
    Name5
    SynonymsD
    Isoform IDQ9HBA0-5
    Features which should be applied to build the isoform sequence: VSP_026614.
    Name6
    SynonymsE
    Isoform IDQ9HBA0-6
    Features which should be applied to build the isoform sequence: VSP_026615, VSP_013436.
  • DISEASE: Defects in TRPV4 are the cause of brachyolmia type 3 [MIM:113500]; also called brachyrachia. The brachyolmias constitute a clinically and genetically heterogeneous group of skeletal dysplasias characterized by a short trunk, scoliosis and mild short stature. Type 3 brachyolmia is an autosomal dominant form with severe kyphoscoliosis and flattened, irregular cervical vertebrae.
  • SIMILARITY: Belongs to the transient receptor family. TrpV subfamily.
  • SIMILARITY: Contains 3 ANK repeats.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF263523; AAG28029.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF258465; AAG16127.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB100308; BAC55864.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB032427; BAB69040.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB073669; BAC06573.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ296305; CAC82937.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
DQ059644; AAZ04918.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
DQ059645; AAZ04919.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
DQ059646; AAZ04920.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC117426; AAI17427.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF279673; AAK69487.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00168624; -.
IPI00168926; -.
IPI00555678; -.
IPI00657947; -.
IPI00658012; -.
IPI00853621; -.
RefSeq NP_067638.3; -.
NP_671737.1; -.
UniGene Hs.506713
3D structure databases
ModBase Q9HBA0.
Protein-protein interaction databases
IntAct Q9HBA0; 9.
PTM databases
PhosphoSite Q9HBA0; -.
Organism-specific databases
GeneCards GC12M108683; -.
H-InvDB HIX0010981; -.
HGNC HGNC:18083; TRPV4.
GenAtlas TRPV4.
HPA HPA007150; -.
MIM 113500; phenotype. [NCBI / EBI]
605427; gene. [NCBI / EBI]
PharmGKB PA38293; -.
Gene expression databases
ArrayExpress Q9HBA0; -.
Bgee Q9HBA0; -.
GermOnline ENSG00000111199; Homo sapiens.
Ontologies
GO
GO:0016021; Cellular component: integral to membrane (non-traceable author statement from UniProtKB).
GO:0005886; Cellular component: plasma membrane (inferred from direct assay from UniProtKB).
GO:0005262; Molecular function: calcium channel activity (inferred from direct assay from UniProtKB).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0005516; Molecular function: calmodulin binding (inferred from mutant phenotype from UniProtKB).
GO:0042802; Molecular function: identical protein binding (inferred from physical interaction from IntAct).
GO:0006816; Biological process: calcium ion transport (inferred from direct assay from UniProtKB).
GO:0006884; Biological process: cell volume homeostasis (traceable author statement from UniProtKB).
GO:0007204; Biological process: elevation of cytosolic calcium ion concentration (inferred from direct assay from UniProtKB).
GO:0007231; Biological process: osmosensory signaling pathway (traceable author statement from UniProtKB).
GO:0009612; Biological process: response to mechanical stimulus (traceable author statement from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR002110; ANK.
IPR005821; Ion_trans.
IPR004729; TRP_channel.
IPR008347; Vanilpoid_rcpt.
IPR008348; Vanilpoid_rcpt_2.
Graphical view of domain structure.
Gene3D G3DSA:1.25.40.20; ANK; 1.
Pfam PF00023; Ank; 3.
PF00520; Ion_trans; 1.
Pfam graphical view of domain structure.
PRINTS PR01768; TRPVRECEPTOR.
PR01769; VRL2RECEPTOR.
SMART SM00248; ANK; 3.
SMART graphical view of domain structure.
TIGRFAMs TIGR00870; trp; 1.
PROSITE PS50297; ANK_REP_REGION; 1.
PS50088; ANK_REPEAT; 1.
PROSITE graphical view of domain structure (profiles).
Proteomic databases
PRIDE Q9HBA0; -.
Genome annotation databases
Ensembl ENSG00000111199; Homo sapiens. [Contig view]
GeneID 59341; -.
KEGG hsa:59341; -.
Phylogenomic databases
HOVERGEN Q9HBA0; -.
OMA Q9HBA0; QPPPILK.
Other
NextBio 65228; -.
SOURCE TRPV4; Homo sapiens.
ProtoNet Q9HBA0.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative splicing; ANK repeat; Calcium; Calcium channel; Calcium transport; Calmodulin-binding; Cell membrane; Disease mutation; Ion transport; Ionic channel; Membrane; Phosphoprotein; Polymorphism; Repeat; Transmembrane; Transport.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   871  871     Transient receptor potential cation channel subfamily V member 4. PRO_0000215347
TOPO_DOM   1   465  465     Cytoplasmic (Potential). 
TRANSMEM   466   486  21     Potential. 
TOPO_DOM   487   508  22     Extracellular (Potential). 
TRANSMEM   509   529  21     Potential. 
TOPO_DOM   530   550  21     Cytoplasmic (Potential). 
TRANSMEM   551   571  21     Potential. 
TOPO_DOM   572   572  1     Extracellular (Potential). 
TRANSMEM   573   593  21     Potential. 
TOPO_DOM   594   616  23     Cytoplasmic (Potential). 
TRANSMEM   617   637  21     Potential. 
TOPO_DOM   638   690  53     Pore forming (Probable). 
TRANSMEM   691   711  21     Potential. 
TOPO_DOM   712   871  160     Cytoplasmic (Potential). 
REPEAT   237   266  30     ANK 1. 
REPEAT   284   313  30     ANK 2. 
REPEAT   369   398  30     ANK 3. 
REGION   812   831  20     Interaction with calmodulin. 
MOD_RES   253   253        Phosphotyrosine (By similarity). 
VAR_SEQ   28    61        Missing (in isoform 5). VSP_026614
VAR_SEQ   239   285        Missing (in isoform 4 and isoform 6). VSP_026615
VAR_SEQ   385   444        Missing (in isoform 2 and isoform 6). VSP_013436
VAR_SEQ   844   871        PLDSMGNPRCDGHQQGYPRKWRTDDAPL -> RHLCRVRRKR (in isoform 3). VSP_013437
VARIANT   19    19  1     P -> S (in dbSNP:rs3742030 [NCBI]). VAR_052391 
VARIANT   565   565  1     A -> T (in dbSNP:rs11068298 [NCBI]). VAR_052392 
VARIANT   616   616  1     R -> Q (in brachyolmia type 3; this mutation results in a gain of function and a constitutive activation of the channel). VAR_054805 
VARIANT   620   620  1     V -> I (in brachyolmia type 3; this mutation results in a gain of function and a constitutive activation of the channel). VAR_054806 
MUTAGEN   816   821        RLRRDR->ELEEDE: Loss of calmodulin binding; when associated with A-828. 
MUTAGEN   821   824        RWSS->AASA: Loss of calmodulin binding. 
MUTAGEN   822   822        W->A: Loss of Ca(2+) dependent current potentiation. 
MUTAGEN   828   828        R->A: Loss of calmodulin binding; when associated with 816-ELEEDE-821. 
CONFLICT   385   385        I -> V (in Ref. 1; AAG28029). 
CONFLICT   452   452        V -> A (in Ref. 6; BAC06573). 
CONFLICT   618   618        L -> P (in Ref. 6; BAC06573). 
CONFLICT   781   781        D -> N (in Ref. 1; AAG28029). 
CONFLICT   820   820        D -> T (in Ref. 4; BAB69040). 
CONFLICT   861   861        P -> T (in Ref. 6; BAC06573). 
CONFLICT   867   867        D -> E (in Ref. 2; AAG16127). 
Sequence information
Length: 871 AA [This is the length of the unprocessed precursor] Molecular weight: 98281 Da [This is the MW of the unprocessed precursor] CRC64: C62056B86C5A6FB6 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MADSSEGPRA GPGEVAELPG DESGTPGGEA FPLSSLANLF EGEDGSLSPS PADASRPAGP 

        70         80         90        100        110        120 
GDGRPNLRMK FQGAFRKGVP NPIDLLESTL YESSVVPGPK KAPMDSLFDY GTYRHHSSDN 

       130        140        150        160        170        180 
KRWRKKIIEK QPQSPKAPAP QPPPILKVFN RPILFDIVSR GSTADLDGLL PFLLTHKKRL 

       190        200        210        220        230        240 
TDEEFREPST GKTCLPKALL NLSNGRNDTI PVLLDIAERT GNMREFINSP FRDIYYRGQT 

       250        260        270        280        290        300 
ALHIAIERRC KHYVELLVAQ GADVHAQARG RFFQPKDEGG YFYFGELPLS LAACTNQPHI 

       310        320        330        340        350        360 
VNYLTENPHK KADMRRQDSR GNTVLHALVA IADNTRENTK FVTKMYDLLL LKCARLFPDS 

       370        380        390        400        410        420 
NLEAVLNNDG LSPLMMAAKT GKIGIFQHII RREVTDEDTR HLSRKFKDWA YGPVYSSLYD 

       430        440        450        460        470        480 
LSSLDTCGEE ASVLEILVYN SKIENRHEML AVEPINELLR DKWRKFGAVS FYINVVSYLC 

       490        500        510        520        530        540 
AMVIFTLTAY YQPLEGTPPY PYRTTVDYLR LAGEVITLFT GVLFFFTNIK DLFMKKCPGV 

       550        560        570        580        590        600 
NSLFIDGSFQ LLYFIYSVLV IVSAALYLAG IEAYLAVMVF ALVLGWMNAL YFTRGLKLTG 

       610        620        630        640        650        660 
TYSIMIQKIL FKDLFRFLLV YLLFMIGYAS ALVSLLNPCA NMKVCNEDQT NCTVPTYPSC 

       670        680        690        700        710        720 
RDSETFSTFL LDLFKLTIGM GDLEMLSSTK YPVVFIILLV TYIILTFVLL LNMLIALMGE 

       730        740        750        760        770        780 
TVGQVSKESK HIWKLQWATT ILDIERSFPV FLRKAFRSGE MVTVGKSSDG TPDRRWCFRV 

       790        800        810        820        830        840 
DEVNWSHWNQ NLGIINEDPG KNETYQYYGF SHTVGRLRRD RWSSVVPRVV ELNKNSNPDE 

       850        860        870 
VVVPLDSMGN PRCDGHQQGY PRKWRTDDAP L 

Q9HBA0 in FASTA format

View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by ca flag CBR Canada Mirror sites: Australia  Brazil  China  Korea  Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!