ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q976G4

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name DNLI_SULTO
Primary accession number Q976G4
Secondary accession numbers None
Integrated into Swiss-Prot on February 21, 2002
Sequence was last modified on December 1, 2001 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 44)
Name and origin of the protein
Protein name DNA ligase
Synonyms EC 6.5.1.1
Polydeoxyribonucleotide synthase [ATP]
Gene name
Name: lig
OrderedLocusNames: ST0223
From
Sulfolobus tokodaii [TaxID: 111955] [HAMAP proteome]
Taxonomy Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=DSM 16993 / JCM 10545 / NBRC 100140 / 7;
DOI=10.1093/dnares/8.4.123; PubMed=11572479 [NCBI, ExPASy, EBI, Israel, Japan]
Kawarabayasi Y., Hino Y., Horikawa H., Jin-no K., Takahashi M., Sekine M., Baba S., Ankai A., Kosugi H., Hosoyama A., Fukui S., Nagai Y., Nishijima K., Otsuka R., Nakazawa H., Takamiya M., Kato Y., Yoshizawa T., Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Masuda S., Yanagii M., Nishimura M., Yamagishi A., Oshima T., Kikuchi H.;
"Complete genome sequence of an aerobic thermoacidophilic Crenarchaeon, Sulfolobus tokodaii strain7.";
DNA Res. 8:123-140(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BA000023; BAB65183.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_376074.1; -.
3D structure databases
SMR Q976G4; 1-590.
ModBase Q976G4.
Ontologies
GO
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from HAMAP).
GO:0003910; Molecular function: DNA ligase (ATP) activity (inferred from electronic annotation from HAMAP).
GO:0007049; Biological process: cell cycle (inferred from electronic annotation from UniProtKB-KW).
GO:0051301; Biological process: cell division (inferred from electronic annotation from UniProtKB-KW).
GO:0006310; Biological process: DNA recombination (inferred from electronic annotation from HAMAP).
GO:0006281; Biological process: DNA repair (inferred from electronic annotation from HAMAP).
GO:0006260; Biological process: DNA replication (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00407; -; 1.
PBIL [Tree]
InterPro IPR000977; DNA_ligase.
IPR012309; DNA_ligase_A_C.
IPR012310; DNA_ligase_A_M.
IPR012308; DNA_ligase_A_N.
IPR016059; DNA_ligase_CS.
IPR012340; NA-bd_OB-fold.
Graphical view of domain structure.
Gene3D G3DSA:2.40.50.140; OB_NA_bd_sub; 1.
Pfam PF04679; DNA_ligase_A_C; 1.
PF01068; DNA_ligase_A_M; 1.
PF04675; DNA_ligase_A_N; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR00574; dnl1; 1.
PROSITE PS00697; DNA_LIGASE_A1; 1.
PS00333; DNA_LIGASE_A2; 1.
PS50160; DNA_LIGASE_A3; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q976G4.
ProtoNet Q976G4.
Genome annotation databases
GeneID 1458113; -.
GenomeReviews BA000023_GR; ST0223.
KEGG sto:ST0223; -.
NMPDR fig|273063.1.peg.242; -.
Phylogenomic databases
HOGENOM Q976G4; -.
Genome annotation databases
CMR Q976G4; ST0223.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Cell cycle; Cell division; Complete proteome; DNA damage; DNA recombination; DNA repair; DNA replication; Ligase; Nucleotide-binding.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   600  600     DNA ligase. PRO_0000059619
ACT_SITE   260   260        N6-AMP-lysine intermediate (By similarity). 
Sequence information
Length: 600 AA [This is the length of the unprocessed precursor] Molecular weight: 68025 Da [This is the MW of the unprocessed precursor] CRC64: 9D85DA4458000539 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MEFKLIAEYF DKLEKISSRL QLTALLTDLF KKADKNVIDK VVYLIQGKLW PDFLGYPELG 

        70         80         90        100        110        120 
VGEKLLIKAI SIAVNVKEEV VEEQLKVVGD LGEVAMRLKK TPQSASILSF LGAQSNEGLT 

       130        140        150        160        170        180 
VEETYESLTK IALASGEGSR DIKIRSLAGL LKKASPLEAK YIVRFVDGRL RVGIGDATIM 

       190        200        210        220        230        240 
DALSTAFTGS TSFRPLIERA YNLRADLGNI AKIIAQQGVE ALKDIKPQVG IPIRPMLAER 

       250        260        270        280        290        300 
MSDPAEILAK VGGEALVDYK YDGERAQIHK KDKEVYIFSR RLENITRMYP DVVEYVREYI 

       310        320        330        340        350        360 
NANEVIIEGE IVAVDPESNE IRPFQELMHR KRKNDINEAI KEYPVNVYLF DLMLYEDADY 

       370        380        390        400        410        420 
TMKPLPERRK KLEEVIKPND KLHIAHHIYT NNVDKLMEFF YDAISNGAEG VMVKSVAKDS 

       430        440        450        460        470        480 
IYQAGSRGFL WIKLKRDYQS EMADSVDLVV VGAFYGRGKR GGKLSSLLMA AYDPETDTFK 

       490        500        510        520        530        540 
TVCKVASGFS DAELDELQKK LMEIKLDKKD PRVDSQLEPD IWVEPKYVAE IIGAEITLSP 

       550        560        570        580        590        600 
EHTCCKDMVS KGAGLSVRFP RFIRWRDDKS IEDATTPKEI YEMYKMKLRK KEEEQHTDEA
Q976G4 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA) 		Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by ca flag CBR Canada Mirror sites: Australia Brazil China Korea Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!