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UniProtKB/Swiss-Prot entry Q91XR8


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name GPX42_RAT
Primary accession number Q91XR8
Secondary accession number Q6PZ55
Integrated into Swiss-Prot on May 23, 2003
Sequence was last modified on February 26, 2008 (Sequence version 3)
Annotations were last modified on    November 4, 2008 (Entry version 47)
Name and origin of the protein
Protein name Phospholipid hydroperoxide glutathione peroxidase, nuclear
Synonyms EC 1.11.1.12
GPX-4
Gene name
Name: Gpx4
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=Wistar;
Maiorino M., Scapin M., Ursini F., Biasolo M., Bosello V., Flohe L.;
"Distinct promoters determine alternative transcription of gpx-4 into PHGPx variants.";
Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Wistar;
Tramer F., Vetere A., Martinelli M., Paroni F., Marsich E., Sandri G., Panfili E.;
"Cloning of cDNA of rat phospholipid hydroperoxide/sperm nucleus glutathione peroxidase.";
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [MRNA] OF 1-250, AND SUBCELLULAR LOCATION.
TISSUE=Testis;
PubMed=11344099 [NCBI, ExPASy, EBI, Israel, Japan]
Pfeifer H., Conrad M., Roethlein D., Kyriakopoulos A., Brielmeier M., Bornkamm G.W., Behne D.;
"Identification of a specific sperm nuclei selenoenzyme necessary for protamine thiol cross-linking during sperm maturation.";
FASEB J. 15:1236-1238(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AJ537598; CAD61278.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY570513; AAS76675.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF274028; AAK74113.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001034938.1; -.
UniGene Rn.3647
3D structure databases
HSSP P00435; 1GP1. [HSSP ENTRY / PDB]
SMR Q91XR8; 92-253.
ModBase Q91XR8.
Protein family/group databases
PeroxiBase 3813; RnoGPx04-c.
Organism-specific databases
RGD 69226; Gpx4.
Ontologies
GO
GO:0005634; Cellular component: nucleus (inferred from sequence or structural similarity from UniProtKB).
GO:0004602; Molecular function: glutathione peroxidase activity (inferred from sequence or structural similarity from UniProtKB).
GO:0006325; Biological process: establishment or maintenance of chromatin architecture (inferred from sequence or structural similarity from UniProtKB).
GO:0007283; Biological process: spermatogenesis (inferred from sequence or structural similarity from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR000889; Glut_peroxidase.
IPR012335; Thioredoxin_fold.
Graphical view of domain structure.
Gene3D G3DSA:3.40.30.10; Thioredoxin_fold; 1.
PANTHER PTHR11592; Glut_peroxidase; 1.
Pfam PF00255; GSHPx; 1.
Pfam graphical view of domain structure.
PRINTS PR01011; GLUTPROXDASE.
PROSITE PS00460; GLUTATHIONE_PEROXID_1; 1.
PS00763; GLUTATHIONE_PEROXID_2; 1.
PS51355; GLUTATHIONE_PEROXID_3; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q91XR8.
ProtoNet Q91XR8.
Genome annotation databases
GeneID 29328; -.
KEGG rno:29328; -.
Phylogenomic databases
HOVERGEN Q91XR8; -.
Other
NextBio 608793; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative splicing; Developmental protein; Nucleus; Oxidoreductase; Peroxidase; Selenium; Selenocysteine.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   253  253     Phospholipid hydroperoxide glutathione peroxidase, nuclear. PRO_0000066626
ACT_SITE   129   129         
NON_STD   129   129        Selenocysteine. 
CONFLICT   9    14        RGRCRQ -> PGRQCAGIRPYGP (in Ref. 3; AAK74113). 
CONFLICT   101   101        A -> S (in Ref. 1; CAD61278). 
CONFLICT   192   192        N -> S (in Ref. 2; AAS76675). 
Sequence information
Length: 253 AA [This is the length of the unprocessed precursor] Molecular weight: 29335 Da [This is the MW of the unprocessed precursor] CRC64: D108602E22DAD29A [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGRAAARKRG RCRQRGRSPG GRRRREPGRQ SPRKRPGPRR RRARARRRRR ARPRRMEPIP 

        70         80         90        100        110        120 
EPFNPRPLLQ DLPQTSNSHE FLGLCASRDD WRCARSMHEF AAKDIDGHMV CLDKYRGCVC 

       130        140        150        160        170        180 
IVTNVASQUG KTDVNYTQLV DLHARYAECG LRILAFPCNQ FGRQEPGSNQ EIKEFAAGYN 

       190        200        210        220        230        240 
VRFDMYSKIC VNGDDAHPLW KWMKVQPKGR GMLGNAIKWN FTKFLIDKNG CVVKRYGPME 

       250 
EPQVIEKDLP CYL 

Q91XR8 in FASTA format

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