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UniProtKB/Swiss-Prot entry Q8NER1


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name TRPV1_HUMAN
Primary accession number Q8NER1
Secondary accession numbers Q9H0G9 Q9H303 Q9H304 Q9NQ74 Q9NY22
Integrated into Swiss-Prot on April 26, 2005
Sequence was last modified on October 1, 2002 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 48)
Name and origin of the protein
Protein name Transient receptor potential cation channel subfamily V member 1
Synonyms TrpV1
Osm-9-like TRP channel 1
OTRPC1
Vanilloid receptor 1
Capsaicin receptor
Gene name
Name: TRPV1
Synonyms: VR1
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY, AND VARIANT VAL-585.
DOI=10.1016/S0304-3959(00)00353-5; PubMed=11050376 [NCBI, ExPASy, EBI, Israel, Japan]
Hayes P., Meadows H.J., Gunthorpe M., Harries M.H., Duckworth M.D., Cairns W., Harrison D.C., Clarke C., Ellington K., Prinjha R.K., Barton A.J., Medhurst A.D., Smith G.D., Topp S., Murdock P., Sanger G.J., Terrett J., Jenkins O., Benham C.D., Randall A.D., Gloger I.S., Davis J.B.;
"Cloning and functional expression of a human orthologue of rat vanilloid receptor-1.";
Pain 88:205-215(2000).
[2]
NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND TISSUE SPECIFICITY.
TISSUE=Spinal ganglion;
DOI=10.1006/bbrc.2001.4482; PubMed=11243859 [NCBI, ExPASy, EBI, Israel, Japan]
Cortright D.N., Crandall M., Sanchez J.F., Zou T., Krause J.E., White G.;
"The tissue distribution and functional characterization of human VR1.";
Biochem. Biophys. Res. Commun. 281:1183-1189(2001).
[3]
NUCLEOTIDE SEQUENCE [MRNA], AND FUNCTION.
TISSUE=Spinal ganglion;
DOI=10.1038/sj.bjp.0703918; PubMed=11226139 [NCBI, ExPASy, EBI, Israel, Japan]
McIntyre P., McLatchie L., Chambers A., Phillips E., Clarke M., Savidge J., Peacock M., Shah K., Winter J., Weerasekera N., Webb M., Rang H., Bevan S., James I.;
"Pharmacological differences between human and rat vanilloid receptor 1 (VR1).";
Br. J. Pharmacol. 132:1084-1094(2001).
[4]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Brain;
Lee D., Ha I.;
Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Testis;
DOI=10.1101/gr.GR1547R; PubMed=11230166 [NCBI, ExPASy, EBI, Israel, Japan]
Wiemann S., Weil B., Wellenreuther R., Gassenhuber J., Glassl S., Ansorge W., Boecher M., Bloecker H., Bauersachs S., Blum H., Lauber J., Duesterhoeft A., Beyer A., Koehrer K., Strack N., Mewes H.-W., Ottenwaelder B., Obermaier B., Tampe J., Heubner D., Wambutt R., Korn B., Klein M., Poustka A.;
"Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs.";
Genome Res. 11:422-435(2001).
[6]
INTERACTION WITH TRPV3.
DOI=10.1038/nature00894; PubMed=12077606 [NCBI, ExPASy, EBI, Israel, Japan]
Smith G.D., Gunthorpe M.J., Kelsell R.E., Hayes P.D., Reilly P., Facer P., Wright J.E., Jerman J.C., Walhin J.-P., Ooi L., Egerton J., Charles K.J., Smart D., Randall A.D., Anand P., Davis J.B.;
"TRPV3 is a temperature-sensitive vanilloid receptor-like protein.";
Nature 418:186-190(2002).
[7]
TISSUE SPECIFICITY.
DOI=10.1111/j.0906-6705.2004.0178.x; PubMed=14987252 [NCBI, ExPASy, EBI, Israel, Japan]
Staender S., Moormann C., Schumacher M., Buddenkotte J., Artuc M., Shpacovitch V., Brzoska T., Lippert U., Henz B.M., Luger T.A., Metze D., Steinhoff M.;
"Expression of vanilloid receptor subtype 1 in cutaneous sensory nerve fibers, mast cells, and epithelial cells of appendage structures.";
Exp. Dermatol. 13:129-139(2004).
[8]
MUTAGENESIS OF TYR-511 AND THR-550.
DOI=10.1074/jbc.M312577200; PubMed=14996838 [NCBI, ExPASy, EBI, Israel, Japan]
Gavva N.R., Klionsky L., Qu Y., Shi L., Tamir R., Edenson S., Zhang T.J., Viswanadhan V.N., Toth A., Pearce L.V., Vanderah T.W., Porreca F., Blumberg P.M., Lile J., Sun Y., Wild K., Louis J.C., Treanor J.J.;
"Molecular determinants of vanilloid sensitivity in TRPV1.";
J. Biol. Chem. 279:20283-20295(2004).
Comments
  • FUNCTION: Receptor-activated non-selective calcium permeant cation channel involved in detection of noxious chemical and thermal stimuli. Seems to mediate proton influx and may be involved in intracellular acidosis in nociceptive neurons. May be involved in mediation of inflammatory pain and hyperalgesia. Sensitized by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases, which involves PKC isozymes and PCL.
  • ENZYME REGULATION: Channel activity is activated via the interaction with PIRT and phosphatidylinositol-4,5-bisphosphate (PIP2). Both PIRT and PIP2 are required to activate channel activity (By similarity).
  • SUBUNIT: Self-associates. Probably homotetramer. May also form a heteromeric channel with TRPV3. Interacts with calmodulin, PIRT, PRKCM and CSK. Interacts with PRKCG and NTRK1, probably by forming a trimeric complex (By similarity).
  • SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein (By similarity).
  • TISSUE SPECIFICITY: Widely expressed at low levels. Expression is elevated in dorsal root ganglia. In skin, expressed in cutaneous sensory nerve fibers, mast cells, epidermal keratinocytes, dermal blood vessels, the inner root sheet and the infundibulum of hair follicles, differentiated sebocytes, sweat gland ducts, and the secretory portion of eccrine sweat glands (at protein level).
  • DOMAIN: The association domain (AD) is necessary for self-association (By similarity).
  • PTM: Phosphorylation by PKA reverses capsaicin-induced dephosphorylation at multiple sites, probably including Ser-117 as a major phosphorylation site. Phoshphorylation by CAMKII seems to regulate binding to vanilloids. Phosphorylated and modulated by PKCM and probably PKCZ. Dephosphorylation by calcineurin seems to lead to receptor desensitization and phosphorylation by CAMKII recovers activity (By similarity).
  • MISCELLANEOUS: Responses evoked by low pH and heat, and capsaicin can be antagonized by capsazepine.
  • SIMILARITY: Belongs to the transient receptor family. TrpV subfamily.
  • SIMILARITY: Contains 6 ANK repeats.
  • SEQUENCE CAUTION:
    • Sequence=AAG43467.1; Type=Frameshift; Positions=498;
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AJ277028; CAB95729.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF196175; AAG43466.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF196176; AAG43467.1; ALT_FRAME; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ272063; CAB89866.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY131289; AAM89472.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL136801; CAB66735.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR JC7621; JC7621.
RefSeq NP_061197.4; -.
NP_542435.2; -.
NP_542436.2; -.
NP_542437.2; -.
UniGene Hs.579217
3D structure databases
ModBase Q8NER1.
PTM databases
PhosphoSite Q8NER1; -.
Organism-specific databases
H-InvDB HIX0013428; -.
HIX0079948; -.
HGNC HGNC:12716; TRPV1.
GenAtlas TRPV1.
MIM 602076; gene. [NCBI / EBI]
PharmGKB PA37329; -.
GeneCards Q8NER1.
Gene expression databases
ArrayExpress Q8NER1; -.
CleanEx HS_TRPV1; -.
GermOnline ENSG00000196689; Homo sapiens.
Ontologies
GO
GO:0005887; Cellular component: integral to plasma membrane (traceable author statement from ProtInc).
GO:0005262; Molecular function: calcium channel activity (traceable author statement from ProtInc).
GO:0007166; Biological process: cell surface receptor linked signal transduction (traceable author statement from ProtInc).
GO:0007635; Biological process: chemosensory behavior (traceable author statement from ProtInc).
GO:0006810; Biological process: transport (traceable author statement from ProtInc).
QuickGo view.
Family and domain databases
InterPro IPR002110; ANK.
IPR005821; Ion_trans.
IPR004729; TRP_channel.
IPR008347; Vanilpoid_rcpt.
IPR008348; Vanilpoid_rcpt_2.
Graphical view of domain structure.
Gene3D G3DSA:1.25.40.20; ANK; 1.
Pfam PF00023; Ank; 3.
PF00520; Ion_trans; 1.
Pfam graphical view of domain structure.
PRINTS PR01415; ANKYRIN.
PR01768; TRPVRECEPTOR.
PR01769; VRL2RECEPTOR.
SMART SM00248; ANK; 4.
SMART graphical view of domain structure.
TIGRFAMs TIGR00870; trp; 1.
PROSITE PS50297; ANK_REP_REGION; 1.
PS50088; ANK_REPEAT; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q8NER1.
Genome annotation databases
Ensembl ENSG00000196689; Homo sapiens. [Contig view]
GeneID 7442; -.
KEGG hsa:7442; -.
Phylogenomic databases
HOVERGEN Q8NER1; -.
Other
BindingDB Q8NER1; -.
DrugBank DB00132; Alpha-Linolenic Acid.
DB00168; Aspartame.
DB00159; Icosapent.
SOURCE TRPV1; Homo sapiens.
ProtoNet Q8NER1.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ANK repeat; ATP-binding; Calcium; Calcium channel; Calcium transport; Calmodulin-binding; Cell membrane; Glycoprotein; Ion transport; Ionic channel; Membrane; Nucleotide-binding; Phosphoprotein; Polymorphism; Repeat; Transmembrane; Transport.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   839  839     Transient receptor potential cation channel subfamily V member 1. PRO_0000215338
TOPO_DOM   1   433  433     Cytoplasmic (Potential). 
TRANSMEM   434   454  21     Potential. 
TOPO_DOM   455   476  22     Extracellular (Potential). 
TRANSMEM   477   497  21     Potential. 
TOPO_DOM   498   513  16     Cytoplasmic (Potential). 
TRANSMEM   514   534  21     Potential. 
TOPO_DOM   535   535  1     Extracellular (Potential). 
TRANSMEM   536   556  21     Potential. 
TOPO_DOM   557   579  23     Cytoplasmic (Potential). 
TRANSMEM   580   600  21     Potential. 
TOPO_DOM   601   659  59     Pore forming (Probable). 
TRANSMEM   660   680  21     Potential. 
TOPO_DOM   681   839  159     Cytoplasmic (Potential). 
REPEAT   111   153  43     ANK 1. 
REPEAT   154   200  47     ANK 2. 
REPEAT   201   247  47     ANK 3. 
REPEAT   248   283  36     ANK 4. 
REPEAT   284   332  49     ANK 5. 
REPEAT   333   359  27     ANK 6. 
REGION   685   713  29     AD (By similarity). 
REGION   768   802  35     Interaction with calmodulin (By similarity). 
REGION   778   793  16     Required for PIP2-mediated channel inhibition (By similarity). 
MOD_RES   117   117        Phosphoserine (By similarity). 
MOD_RES   145   145        Phosphothreonine (By similarity). 
MOD_RES   371   371        Phosphothreonine (By similarity). 
MOD_RES   502   502        Phosphoserine (By similarity). 
MOD_RES   705   705        Phosphothreonine (By similarity). 
MOD_RES   775   775        Phosphoserine (By similarity). 
MOD_RES   801   801        Phosphoserine (By similarity). 
MOD_RES   821   821        Phosphoserine (By similarity). 
CARBOHYD   604   604        N-linked (GlcNAc...) (By similarity). 
VARIANT   585   585  1     I -> V. VAR_022246 
MUTAGEN   511   511        Y->A: Loss of sensitivity to capsaicin. 
MUTAGEN   550   550        T->I: Reduces sensitivity to capsaicin 40-fold. 
CONFLICT   91    91        P -> S (in Ref. 2; AAG43467). 
CONFLICT   315   315        I -> M (in Ref. 2; AAG43466). 
CONFLICT   336   336        T -> M (in Ref. 3; CAB89866). 
CONFLICT   469   469        T -> I (in Ref. 2; AAG43466/AAG43467 and 5; CAB66735). 
Sequence information
Length: 839 AA [This is the length of the unprocessed precursor] Molecular weight: 94938 Da [This is the MW of the unprocessed precursor] CRC64: 7142F59D4318996F [This is a checksum on the sequence]
        10         20         30         40         50         60 
MKKWSSTDLG AAADPLQKDT CPDPLDGDPN SRPPPAKPQL STAKSRTRLF GKGDSEEAFP 

        70         80         90        100        110        120 
VDCPHEEGEL DSCPTITVSP VITIQRPGDG PTGARLLSQD SVAASTEKTL RLYDRRSIFE 

       130        140        150        160        170        180 
AVAQNNCQDL ESLLLFLQKS KKHLTDNEFK DPETGKTCLL KAMLNLHDGQ NTTIPLLLEI 

       190        200        210        220        230        240 
ARQTDSLKEL VNASYTDSYY KGQTALHIAI ERRNMALVTL LVENGADVQA AAHGDFFKKT 

       250        260        270        280        290        300 
KGRPGFYFGE LPLSLAACTN QLGIVKFLLQ NSWQTADISA RDSVGNTVLH ALVEVADNTA 

       310        320        330        340        350        360 
DNTKFVTSMY NEILILGAKL HPTLKLEELT NKKGMTPLAL AAGTGKIGVL AYILQREIQE 

       370        380        390        400        410        420 
PECRHLSRKF TEWAYGPVHS SLYDLSCIDT CEKNSVLEVI AYSSSETPNR HDMLLVEPLN 

       430        440        450        460        470        480 
RLLQDKWDRF VKRIFYFNFL VYCLYMIIFT MAAYYRPVDG LPPFKMEKTG DYFRVTGEIL 

       490        500        510        520        530        540 
SVLGGVYFFF RGIQYFLQRR PSMKTLFVDS YSEMLFFLQS LFMLATVVLY FSHLKEYVAS 

       550        560        570        580        590        600 
MVFSLALGWT NMLYYTRGFQ QMGIYAVMIE KMILRDLCRF MFVYIVFLFG FSTAVVTLIE 

       610        620        630        640        650        660 
DGKNDSLPSE STSHRWRGPA CRPPDSSYNS LYSTCLELFK FTIGMGDLEF TENYDFKAVF 

       670        680        690        700        710        720 
IILLLAYVIL TYILLLNMLI ALMGETVNKI AQESKNIWKL QRAITILDTE KSFLKCMRKA 

       730        740        750        760        770        780 
FRSGKLLQVG YTPDGKDDYR WCFRVDEVNW TTWNTNVGII NEDPGNCEGV KRTLSFSLRS 

       790        800        810        820        830 
SRVSGRHWKN FALVPLLREA SARDRQSAQP EEVYLRQFSG SLKPEDAEVF KSPAASGEK 

Q8NER1 in FASTA format

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