ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/TrEMBL entry Q8L5Y6

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name Q8L5Y6_ARATH
Primary accession number Q8L5Y6
Secondary accession numbers None
Integrated into TrEMBL on October 1, 2002
Sequence was last modified on October 1, 2002 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 33)
Name and origin of the protein
Protein name Putative uncharacterized protein At2g02560 (At2g02560)
Synonyms None
Gene name
OrderedLocusNames: At2g02560
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 1: Evidence at protein level;
References
[1]
 NUCLEOTIDE SEQUENCE.
Nguyen M., Karlin-Neumann G., Southwick A., Lam B., Miranda M., Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J., Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases.
[2]
 NUCLEOTIDE SEQUENCE.
Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Dale J.M., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Arabidopsis ORF clones.";
Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AY099857; AAM20708.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BT010134; AAQ22603.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_178360.2; -.
UniGene At.41482
3D structure databases
ModBase Q8L5Y6.
Protein-protein interaction databases
IntAct Q8L5Y6; -.
Organism-specific databases
TAIR At2g02560; -.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR011989; ARM-like.
IPR000357; HEAT.
IPR013932; TATA_bd_TIP120.
Graphical view of domain structure.
Gene3D G3DSA:1.25.10.10; ARM-like; 1.
Pfam PF02985; HEAT; 3.
PF08623; TIP120; 1.
Pfam graphical view of domain structure.
Genome annotation databases
GeneID 814786; -.
GenomeReviews CT485783_GR; AT2G02560.
KEGG ath:AT2G02560; -.
NMPDR fig|3702.1.peg.7850; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome.
Features
None
Sequence information
Length: 1219 AA Molecular weight: 134897 Da CRC64: B0F5769754DE6040 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MANLQVSGIL EKFQMTGKDK DYRYMATSDL LNELNKDSFK IDLDLEVRLS SIILQQLDDV 

        70         80         90        100        110        120 
AGDVSGLAVK CLAPLVKKVG EERIVEMTNK LCDKLLHGKD QHRDTASIAL RTVVAQIAPT 

       130        140        150        160        170        180 
LAPSILVTLT PQMIGGISGQ GMSSGIKCEC LEIMCDVVQK YGSLMTDDHE KLLNTLLLQL 

       190        200        210        220        230        240 
GCNQATVRKK TVTCIASLAS SLSDDLLAKA TVEVVKNLSN RNAKSEITRT NIQMIGALCR 

       250        260        270        280        290        300 
AVGYRFGTHL GNTVPVLINY CTSASENDEE LREYSLQALE SFLLRCPRDI SPYCDEILNL 

       310        320        330        340        350        360 
TLEYISYDPN FTDNMEEDTD NETLEDEEDD ESANEYTDDE DASWKVRRAA AKCLAGLIVS 

       370        380        390        400        410        420 
RSEMLTKVYQ EACPKLIDRF KEREENVKMD VFNTFIDLLR QTGNVTKGQT DTDESSPKWL 

       430        440        450        460        470        480 
LKQEVSKIVK SINRQLREKS VKTKVGAFSV LRELVVVLPD CLADHIGSLV PGIERALNDK 

       490        500        510        520        530        540 
SSTSNLKIEA LVFTKLVLAS HAPPVFHPYI KALSSPVLAA VGERYYKVTA EALRVCGELV 

       550        560        570        580        590        600 
RVVRPSTAGM GFDFKPFVHP IYNAIMSRLT NQDQDQEVKE CAITCMGLVI STFGDQLRAE 

       610        620        630        640        650        660 
LPSCLPVLVD RMGNEITRLT AVKAFSVIAT SPLHINLSCV LDHLIAELTG FLRKANRVLR 

       670        680        690        700        710        720 
QATLITMNTL VTAYGDKIGS EAYEVILVEL SSLISVSDLH MTALALELCC TLMTGKSCSE 

       730        740        750        760        770        780 
NISLAVRNKV LPQALTLVKS PLLQGQALLD LQKFFEALVY HANTSFYTLL ESLLSCAKPS 

       790        800        810        820        830        840 
PQSGGVPKQA LYSIAQCVAV LCLAAGDKNC SSTVKMLMEI LKDDSGTNSA KQHLALLSLG 

       850        860        870        880        890        900 
EIGRRKDLSA HAGIETIVIE SFQSPFEEIK SAASYALGNI AVGNLSNYLP FILDQIDNQQ 

       910        920        930        940        950        960 
KKQYILLHSL KEVIVRQSVD KADFQNSSVE KILALLFNHC ESEEEGVRNV VAECLGKMAL 

       970        980        990       1000       1010       1020 
IEPEKLVPAL QVRTTSPAAF TRATVVTAVK YSVVERPEKL DEIIFPQISS FLMLIKDGDR 

      1030       1040       1050       1060       1070       1080 
HVRRAAVSAL STFAHYKPNL IKGLLPELLP LLYDQTVIKK ELIRTVDLGP FKHVVDDGLE 

      1090       1100       1110       1120       1130       1140 
LRKAAFECVF TLVDSCLDQV NPSSFIVPFL KSGLEDHYDL KMLCHLILSL LADKCPSAVL 

      1150       1160       1170       1180       1190       1200 
AVLDSLVEPL HKTISFKPKQ DAVKQEHDRN EDMIRSALRA ISSLDRINGV DYSHKFKGLM 

      1210 
GDMKRSVPLW EKFQTIRNE
Q8L5Y6 in FASTA format

View entry in original UniProtKB/TrEMBL format
View entry in raw text format (no links)
Request for annotation of this UniProtKB/TrEMBL entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA) 		Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by ca flag CBR Canada Mirror sites: Australia Brazil China Korea Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!