ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q8BVD7


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name C1QT7_MOUSE
Primary accession number Q8BVD7
Secondary accession number Q8CHX9
Integrated into Swiss-Prot on April 26, 2005
Sequence was last modified on April 26, 2005 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 40)
Name and origin of the protein
Protein name Complement C1q tumor necrosis factor-related protein 7 [Precursor]
Synonyms None
Gene name
Name: C1qtnf7
Synonyms: Ctrp7
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J;
TISSUE=Lung;
DOI=10.1126/science.1112014; PubMed=16141072 [NCBI, ExPASy, EBI, Israel, Japan]
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J., Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
"The transcriptional landscape of the mammalian genome.";
Science 309:1559-1563(2005).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J;
TISSUE=Mammary gland;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AK078818; BAC37409.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC038308; AAH38308.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_780634.2; -.
UniGene Mm.275553
3D structure databases
HSSP Q60994; 1C28. [HSSP ENTRY / PDB]
ModBase Q8BVD7.
PTM databases
PhosphoSite Q8BVD7; -.
Organism-specific databases
MGI MGI:1925911; C1qtnf7.
Gene expression databases
ArrayExpress Q8BVD7; -.
CleanEx MM_C1QTNF7; -.
GermOnline ENSMUSG00000061535; Mus musculus.
Ontologies
GO
GO:0005615; Cellular component: extracellular space (inferred from direct assay from MGI).
GO:0051260; Biological process: protein homooligomerization (inferred from direct assay from MGI).
QuickGo view.
Family and domain databases
InterPro IPR001073; C1q.
IPR008160; Collagen.
IPR008983; Tumour_necrosis_fac-like.
Graphical view of domain structure.
Gene3D G3DSA:2.60.120.40; Tumour_necrosis_fac-like; 1.
Pfam PF00386; C1q; 1.
PF01391; Collagen; 2.
Pfam graphical view of domain structure.
PRINTS PR00007; COMPLEMNTC1Q.
SMART SM00110; C1Q; 1.
SMART graphical view of domain structure.
PROSITE PS50871; C1Q; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q8BVD7.
Genome annotation databases
Ensembl ENSMUSG00000061535; Mus musculus. [Contig view]
GeneID 109323; -.
KEGG mmu:109323; -.
Phylogenomic databases
HOGENOM Q8BVD7; -.
HOVERGEN Q8BVD7; -.
Other
SOURCE C1qtnf7; Mus musculus.
ProtoNet Q8BVD7.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Collagen; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    16  16     Potential. 
CHAIN   17   289  273     Complement C1q tumor necrosis factor-related protein 7. PRO_0000003540
DOMAIN   38   139  102     Collagen-like. 
DOMAIN   143   279  137     C1q. 
CONFLICT   20    20        A -> P (in Ref. 1; BAC37409). 
CONFLICT   193   193        Y -> C (in Ref. 1; BAC37409). 
Sequence information
Length: 289 AA [This is the length of the unprocessed precursor] Molecular weight: 30517 Da [This is the MW of the unprocessed precursor] CRC64: 45ED4E3C88E92CCB [This is a checksum on the sequence]
        10         20         30         40         50         60 
MIVLLYVTSL AICASGQPRA NQAKGESYSP RYICSIPGLP GPPGPPGANG SPGPHGRIGL 

        70         80         90        100        110        120 
PGRDGRDGRK GEKGEKGTAG LKGKTGPLGL AGEKGDQGET GKKGPIGPEG EKGEVGPAGP 

       130        140        150        160        170        180 
PGPKGDRGDQ GDPGLPGVCR CGSIVLKSAF SVGITTSYPE ERLPIIFNKV LFNEGEHYNP 

       190        200        210        220        230        240 
ATGKFICAFP GIYYFSYDIT LANKHLAIGL VHNGQYRIRT FDANTGNHDV ASGSTVIYLQ 

       250        260        270        280 
PEDEVWLEIF FNDQNGLFSD PGWADSLFSG FLLYVDTDYL DSISEDDEL 

Q8BVD7 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by ca flag CBR Canada Mirror sites: Australia  Brazil  China  Korea  Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!