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UniProtKB/Swiss-Prot entry Q7Z3C6


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ATG9A_HUMAN
Primary accession number Q7Z3C6
Secondary accession numbers Q6P0N7 Q7Z317 Q7Z320 Q8NDK6 Q8WU65 Q9BVL5 Q9H6L1 Q9HAG7
Integrated into Swiss-Prot on April 12, 2005
Sequence was last modified on April 12, 2005 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 47)
Name and origin of the protein
Protein name Autophagy-related protein 9A
Synonym APG9-like 1
Gene name
Name: ATG9A
Synonyms: APG9L1
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2), AND VARIANT GLY-592.
TISSUE=Fetal brain, Lung endothelial cell, Rectum tumor, and Testis;
The German cDNA consortium;
Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3).
TISSUE=Brain, and Lymph;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 156-839, AND VARIANT GLY-592.
TISSUE=Embryo;
DOI=10.1038/ng1285; PubMed=14702039 [NCBI, ExPASy, EBI, Israel, Japan]
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human cDNAs.";
Nat. Genet. 36:40-45(2004).
[4]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-828, AND MASS SPECTROMETRY.
TISSUE=Epithelium;
DOI=10.1016/j.cell.2006.09.026; PubMed=17081983 [NCBI, ExPASy, EBI, Israel, Japan]
Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M.;
"Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.";
Cell 127:635-648(2006).
[5]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-656, AND MASS SPECTROMETRY.
DOI=10.1021/pr0705441; PubMed=18220336 [NCBI, ExPASy, EBI, Israel, Japan]
Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III;
"Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis.";
J. Proteome Res. 7:1346-1351(2008).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AL833865; CAD38723.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BX537984; CAD97944.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BX538192; CAD98061.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BX538198; CAD98064.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC001098; AAH01098.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC021202; AAH21202.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC065534; AAH65534.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK021732; BAB13882.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK027448; BAB55119.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK025822; BAB15246.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_076990.4; -.
UniGene Hs.323363
3D structure databases
ModBase Q7Z3C6.
PTM databases
PhosphoSite Q7Z3C6; -.
Organism-specific databases
HGNC HGNC:22408; ATG9A.
GeneLynx ATG9A; Homo sapiens.
GenAtlas ATG9A.
PharmGKB PA134931318; -.
GeneCards Q7Z3C6.
Gene expression databases
ArrayExpress Q7Z3C6; -.
CleanEx HS_ATG9A; -.
GermOnline ENSG00000198925; Homo sapiens.
Ontologies
GO
GO:0000045; Biological process: autophagic vacuole formation (inferred from mutant phenotype from MGI).
QuickGo view.
Family and domain databases
InterPro IPR007241; Autophagy_prot_9.
Graphical view of domain structure.
PANTHER PTHR13038; APG9; 1.
Pfam PF04109; APG9; 1.
Pfam graphical view of domain structure.
BLOCKS Q7Z3C6.
Genome annotation databases
Ensembl ENSG00000198925; Homo sapiens. [Contig view]
GeneID 79065; -.
Phylogenomic databases
HOVERGEN Q7Z3C6; -.
Other
LinkHub Q7Z3C6; -.
ProtoNet Q7Z3C6.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative splicing; Autophagy; Cytoplasmic vesicle; Membrane; Phosphoprotein; Polymorphism; Protein transport; Transmembrane; Transport.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   839  839     Autophagy-related protein 9A. PRO_0000119820
TOPO_DOM   1    66  66     Cytoplasmic (By similarity). 
TRANSMEM   67    87  21     Potential. 
TOPO_DOM   88   131  44     Lumenal (By similarity). 
TRANSMEM   132   152  21     Potential. 
TOPO_DOM   153   289  137     Cytoplasmic (By similarity). 
TRANSMEM   290   310  21     Potential. 
TOPO_DOM   311   371  61     Lumenal (By similarity). 
TRANSMEM   372   392  21     Potential. 
TOPO_DOM   393   400  8     Cytoplasmic (By similarity). 
TRANSMEM   401   421  21     Potential. 
TOPO_DOM   422   473  52     Lumenal (By similarity). 
TRANSMEM   474   494  21     Potential. 
TOPO_DOM   495   839  345     Cytoplasmic (By similarity). 
MOD_RES   656   656        Phosphoserine. 
MOD_RES   828   828        Phosphoserine. 
VAR_SEQ   1    61        Missing (in isoform 2). VSP_013396
VAR_SEQ   455   528        NAHRSQTRDEFAQLFQYKAVFILEELLSPIVTPLILIFCL RPRALEIIDFFRNFTVEVVGVGDTCSFAQMDVRQ -> VHFGRVAEPHCHTPHPHLLPAPTGPGDYRLLPKLHRGGRW CGRYLLLCSDGCSPAWSSPVAICWADRGLSVPAS (in isoform 3). VSP_013397
VAR_SEQ   529   839        Missing (in isoform 3). VSP_013398
VARIANT   592   592  1     S -> G (in dbSNP:rs2276635 [NCBI]). VAR_021835 
CONFLICT   39    39        R -> H (in Ref. 1; CAD98061 and 2; AAH65534). 
CONFLICT   300   300        L -> P (in Ref. 1; CAD97944). 
CONFLICT   381   381        A -> T (in Ref. 2; AAH65534). 
CONFLICT   519   519        C -> R (in Ref. 1; CAD98061). 
CONFLICT   567   567        W -> R (in Ref. 1; CAD98061). 
CONFLICT   669   669        H -> N (in Ref. 3; BAB15246). 
CONFLICT   765   765        A -> V (in Ref. 1; CAD97944). 
Sequence information
Length: 839 AA [This is the length of the unprocessed precursor] Molecular weight: 94466 Da [This is the MW of the unprocessed precursor] CRC64: AD60A34B1765DED8 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAQFDTEYQR LEASYSDSPP GEEDLLVHVA EGSKSPWHRI ENLDLFFSRV YNLHQKNGFT 

        70         80         90        100        110        120 
CMLIGEIFEL MQFLFVVAFT TFLVSCVDYD ILFANKMVNH SLHPTEPVKV TLPDAFLPAQ 

       130        140        150        160        170        180 
VCSARIQENG SLITILVIAG VFWIHRLIKF IYNICCYWEI HSFYLHALRI PMSALPYCTW 

       190        200        210        220        230        240 
QEVQARIVQT QKEHQICIHK RELTELDIYH RILRFQNYMV ALVNKSLLPL RFRLPGLGEA 

       250        260        270        280        290        300 
VFFTRGLKYN FELILFWGPG SLFLNEWSLK AEYKRGGQRL ELAQRLSNRI LWIGIANFLL 

       310        320        330        340        350        360 
CPLILIWQIL YAFFSYAEVL KREPGALGAR CWSLYGRCYL RHFNELEHEL QSRLNRGYKP 

       370        380        390        400        410        420 
ASKYMNCFLS PLLTLLAKNG AFFAGSILAV LIALTIYDED VLAVEHVLTT VTLLGVTVTV 

       430        440        450        460        470        480 
CRSFIPDQHM VFCPEQLLRV ILAHIHYMPD HWQGNAHRSQ TRDEFAQLFQ YKAVFILEEL 

       490        500        510        520        530        540 
LSPIVTPLIL IFCLRPRALE IIDFFRNFTV EVVGVGDTCS FAQMDVRQHG HPQWLSAGQT 

       550        560        570        580        590        600 
EASVYQQAED GKTELSLMHF AITNPGWQPP RESTAFLGFL KEQVQRDGAA ASLAQGGLLP 

       610        620        630        640        650        660 
ENALFTSIQS LQSESEPLSL IANVVAGSSC RGPPLPRDLQ GSRHRAEVAS ALRSFSPLQP 

       670        680        690        700        710        720 
GQAPTGRAHS TMTGSGVDAR TASSGSSVWE GQLQSLVLSE YASTEMSLHA LYMHQLHKQQ 

       730        740        750        760        770        780 
AQAEPERHVW HRRESDESGE SAPDEGGEGA RAPQSIPRSA SYPCAAPRPG APETTALHGG 

       790        800        810        820        830 
FQRRYGGITD PGTVPRVPSH FSRLPLGGWA EDGQSASRHP EPVPEEGSED ELPPQVHKV 

Q7Z3C6 in FASTA format

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