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UniProtKB/Swiss-Prot entry Q5FWU3

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ATG9A_RAT
Primary accession number Q5FWU3
Secondary accession numbers None
Integrated into Swiss-Prot on April 12, 2005
Sequence was last modified on March 1, 2005 (Sequence version 1)
Annotations were last modified on    June 16, 2009 (Entry version 38)
Name and origin of the protein
Protein name Autophagy-related protein 9A
Synonym APG9-like 1
Gene name
Name: Atg9a
Synonyms: Apg9l1
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 2: Evidence at transcript level;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Heart;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BC089204; AAH89204.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00366973; -.
RefSeq NP_001014240.1; -.
UniGene Rn.35248
3D structure databases
ModBase Q5FWU3.
Organism-specific databases
RGD 1310450; Atg9a.
Gene expression databases
ArrayExpress Q5FWU3; -.
GermOnline ENSRNOG00000018975; Rattus norvegicus.
Ontologies
GO
GO:0000421; Cellular component: autophagic vacuole membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0031410; Cellular component: cytoplasmic vesicle (inferred from electronic annotation from UniProtKB-SubCell).
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0006914; Biological process: autophagy (inferred from expression pattern from RGD).
GO:0015031; Biological process: protein transport (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR007241; Autophagy-rel_prot_9.
Graphical view of domain structure.
PANTHER PTHR13038; APG9; 1.
Pfam PF04109; APG9; 1.
Pfam graphical view of domain structure.
Genome annotation databases
Ensembl ENSRNOG00000018975; Rattus norvegicus. [Contig view]
GeneID 363254; -.
KEGG rno:363254; -.
Phylogenomic databases
HOVERGEN Q5FWU3; -.
Other
NextBio 683017; -.
ProtoNet Q5FWU3.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Autophagy; Cytoplasmic vesicle; Membrane; Phosphoprotein; Protein transport; Transmembrane; Transport.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   839  839     Autophagy-related protein 9A. PRO_0000119823
TOPO_DOM   1    66  66     Cytoplasmic (By similarity). 
TRANSMEM   67    87  21     Potential. 
TOPO_DOM   88   131  44     Lumenal (By similarity). 
TRANSMEM   132   152  21     Potential. 
TOPO_DOM   153   289  137     Cytoplasmic (By similarity). 
TRANSMEM   290   310  21     Potential. 
TOPO_DOM   311   371  61     Lumenal (By similarity). 
TRANSMEM   372   392  21     Potential. 
TOPO_DOM   393   400  8     Cytoplasmic (By similarity). 
TRANSMEM   401   421  21     Potential. 
TOPO_DOM   422   473  52     Lumenal (By similarity). 
TRANSMEM   474   494  21     Potential. 
TOPO_DOM   495   839  345     Cytoplasmic (By similarity). 
MOD_RES   14    14        Phosphoserine (By similarity). 
MOD_RES   18    18        Phosphoserine (By similarity). 
MOD_RES   656   656        Phosphoserine (By similarity). 
MOD_RES   735   735        Phosphoserine (By similarity). 
MOD_RES   738   738        Phosphoserine (By similarity). 
MOD_RES   741   741        Phosphoserine (By similarity). 
MOD_RES   828   828        Phosphoserine (By similarity). 
Sequence information
Length: 839 AA [This is the length of the unprocessed precursor] Molecular weight: 94488 Da [This is the MW of the unprocessed precursor] CRC64: 18E9A65B55E03C14 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MAQFDTEYQR LEASYSDSPP GEEDLLVHVA EGSKSPWHHI ENLDLFFSRV YNLHQKNGFT 

        70         80         90        100        110        120 
CMLIGEIFEL MQFLFVVAFT TFLVSCVDYD ILFANKMVNH SLHPTEPVKV TLPDAFLPAQ 

       130        140        150        160        170        180 
VCSARIQENG SLITILVIAG VFWIHRLIKF IYNICCYWEI HSFYLHALRI PMSALPYCTW 

       190        200        210        220        230        240 
QEVQARIVQT QKEHQICIHK RELTELDIYH RILRFQNYMV ALVNKSLLPL RFRLPGLGEV 

       250        260        270        280        290        300 
VFFTRGLKYN FELILFWGPG SLFLNEWSLK AEYKRGGQRL ELAQRLSNRI LWIGIANFLL 

       310        320        330        340        350        360 
CPLILIWQIL YAFFSYAEVL KREPGALGAR CWSLYGRCYL RHFNELEHEL QSRLNRGYKP 

       370        380        390        400        410        420 
ASKYMNCFLS PLLTLLAKNG AFFAGSILAV LIALTIYDED VLAVEHVLTT VTLLGVTVTV 

       430        440        450        460        470        480 
CRSFIPDQHM VFCPEQLLRV ILAHIHYMPD HWQGNAHRSQ TRDEFAQLFQ YKAVFILEEL 

       490        500        510        520        530        540 
LSPIVTPLIL IFCLRPRALE IIDFFRNFTV EVVGVGDTCS FAQMDVRQHG HPQWLSGGQT 

       550        560        570        580        590        600 
EASVYQQAED GKTELSLMHF AITNPGWQPP RESTAFLGFL KEQVQRDGAA AGLAQGGLLP 

       610        620        630        640        650        660 
ENALFTSIQS LQSESEPLSL IANVVAGSSC RGPPLSRDLQ GSRHRADVAS ALRSFSPLQP 

       670        680        690        700        710        720 
GQAPQGRVPS TMTGSGVDAR TASSGSSVWE GQLQSLVLSE YASTEMSLHA LYMHQLHKQQ 

       730        740        750        760        770        780 
TQAEPERHVW HRRESDESGE SAPEEGGEGA RAPQPIPRSA SYPCATPRPG APETTALHGG 

       790        800        810        820        830 
FQRRYGGITD PGTVPRAPSH FSRLPLGGWA EDGQPASRHP EPVPEEGSED ELPPQVHKV
Q5FWU3 in FASTA format

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