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UniProtKB/Swiss-Prot entry Q19000

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BODG_CAEEL
Primary accession number Q19000
Secondary accession numbers None
Integrated into Swiss-Prot on July 15, 1999
Sequence was last modified on November 1, 1996 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 49)
Name and origin of the protein
Protein name Probable gamma-butyrobetaine dioxygenase
Synonyms EC 1.14.11.1
Gamma-butyrobetaine,2-oxoglutarate dioxygenase
Gamma-butyrobetaine hydroxylase
Gamma-BBH
Gene name
Name: gbh-1
ORFNames: D2089.5
From
Caenorhabditis elegans [TaxID: 6239] 
Taxonomy Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
Protein existence 2: Evidence at transcript level;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Bristol N2;
DOI=10.1126/science.282.5396.2012; PubMed=9851916 [NCBI, ExPASy, EBI, Israel, Japan]
The C. elegans sequencing consortium;
"Genome sequence of the nematode C. elegans: a platform for investigating biology.";
Science 282:2012-2018(1998).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Z36948; CAA85412.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T20380; T20380.
RefSeq NP_496305.1; -.
UniGene Cel.14890
3D structure databases
ModBase Q19000.
Organism-specific databases
WormBase WBGene00001522; gbh-1.
WormPep D2089.5; CE00940. [WormPep / WorfDB]
Gene expression databases
ArrayExpress Q19000; -.
Ontologies
GO
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0008336; Molecular function: gamma-butyrobetaine dioxygenase activity (inferred from electronic annotation from EC).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from InterPro).
GO:0016702; Molecular function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (inferred from electronic annotation from UniProtKB-KW).
GO:0045329; Biological process: carnitine biosynthetic process (inferred from electronic annotation from InterPro).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR012775; 2-oxoglut_dOase.
IPR003819; Taurine_dOase.
Graphical view of domain structure.
Pfam PF02668; TauD; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR02409; carnitine_bodg; 1.
ProtoNet Q19000.
Genome annotation databases
Ensembl D2089.5; Caenorhabditis elegans. [Contig view]
GeneID 174648; -.
KEGG cel:D2089.5; -.
NMPDR fig|6239.3.peg.7294; -.
Other
NextBio 884906; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Carnitine biosynthesis; Complete proteome; Dioxygenase; Iron; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   421  421     Probable gamma-butyrobetaine dioxygenase. PRO_0000207088
Sequence information
Length: 421 AA [This is the length of the unprocessed precursor] Molecular weight: 48436 Da [This is the MW of the unprocessed precursor] CRC64: 10949C4BF8262DF6 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MLSALLIRNI RNASKLASVA GPNSDRIVNV KWSDGKTGVF PLIWLRDTSP DPSTYTISPA 

        70         80         90        100        110        120 
MTARKLTMLE FDVEQNARKL WIDEDANCLK IEWESGVLSE FPSEWLKIRN PSDQEARRRR 

       130        140        150        160        170        180 
RKVYLFPEQT WGKAEIEGKL KKFSHEEFMK NEQVVHDFLQ AVCIDGIAVL KGAPQGVRGA 

       190        200        210        220        230        240 
VEAIGDRIGM IKRTHFGLVF EVSLKADASN MAYASNGGLP FHTDFPSLSH PPQLQMLHML 

       250        260        270        280        290        300 
QSAEEGGHSL FVDGFHVAEQ LRVEKPEIFK ILTTQSMEYI EEGYDVHEIN GKTIRFDYDM 

       310        320        330        340        350        360 
CARHKVIRLN DDGKVNKIQF GNAMRSWFYD CEPSKVQDVY RAMKTFTEYC YQPRNMLKFR 

       370        380        390        400        410        420 
LEDGDTVLWA NQRLLHTRDG FRNAPEKART LTGCYFDWDI VKSRVRFLRD KLSLEQNQPS 


A
Q19000 in FASTA format

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