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UniProtKB/Swiss-Prot entry Q0E4K1


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name CATA1_ORYSJ
Primary accession number Q0E4K1
Secondary accession numbers A3A2F1 P29611 Q6Z7B2
Integrated into Swiss-Prot on July 10, 2007
Sequence was last modified on October 17, 2006 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 19)
Name and origin of the protein
Protein name Catalase isozyme A
Synonyms CAT-A
EC 1.11.1.6
Gene name
Name: CATA
OrderedLocusNames: Os02g0115700, LOC_Os02g02400
ORFNames: OJ1442_E05.8-1, P0036E06.27-1, OsJ_004973
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
TISSUE=Leaf;
DOI=10.1007/BF00049328; PubMed=8605302 [NCBI, ExPASy, EBI, Israel, Japan]
Higo K., Higo H.;
"Cloning and characterization of the rice CatA catalase gene, a homologue of the maize Cat3 gene.";
Plant Mol. Biol. 30:505-521(1996).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature03895; PubMed=16100779 [NCBI, ExPASy, EBI, Israel, Japan]
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[3]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
DOI=10.1101/gr.5509507; PubMed=17210932 [NCBI, ExPASy, EBI, Israel, Japan]
The rice annotation project (RAP);
"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.";
Genome Res. 17:175-183(2007).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1371/journal.pbio.0030038; PubMed=15685292 [NCBI, ExPASy, EBI, Israel, Japan]
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Nipponbare;
DOI=10.1126/science.1081288; PubMed=12869764 [NCBI, ExPASy, EBI, Israel, Japan]
The rice full-length cDNA consortium;
"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.";
Science 301:376-379(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
D29966; BAA06232.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP004121; BAD07711.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP004867; BAD07936.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP008208; BAF07587.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CM000139; EAZ21490.1; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK065094; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
AK099923; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
RefSeq NP_001045673.1; -.
UniGene Os.9172
3D structure databases
HSSP P46206; 1M7S. [HSSP ENTRY / PDB]
ModBase Q0E4K1.
Protein family/group databases
PeroxiBase 5146; OsKat01.
Organism-specific databases
Gramene P29611; -.
Ontologies
GO
GO:0009514; Cellular component: glyoxysome (inferred from electronic annotation from UniProtKB-KW).
GO:0005777; Cellular component: peroxisome (inferred from electronic annotation from UniProtKB-KW).
GO:0004096; Molecular function: catalase activity (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0042744; Biological process: hydrogen peroxide catabolic process (inferred from electronic annotation from UniProtKB-KW).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR002226; Catalase.
IPR011614; Catalase_N.
Graphical view of domain structure.
Gene3D G3DSA:2.40.180.10; Catalase_N; 1.
PANTHER PTHR11465; Catalase; 1.
Pfam PF00199; Catalase; 1.
Pfam graphical view of domain structure.
PRINTS PR00067; CATALASE.
ProDom PD000510; Catalase; 1.
[Domain structure / List of seq. sharing at least 1 domain]
PROSITE PS00437; CATALASE_1; 1.
PS00438; CATALASE_2; 1.
PS51402; CATALASE_3; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet Q0E4K1.
Genome annotation databases
GeneID 4328073; -.
KEGG osa:4328073; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Glyoxysome; Heme; Hydrogen peroxide; Iron; Metal-binding; Oxidoreductase; Peroxidase; Peroxisome.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   492  492     Catalase isozyme A. PRO_0000084952
ACT_SITE   65    65        By similarity. 
ACT_SITE   138   138        By similarity. 
METAL   348   348        Iron (heme axial ligand) (By similarity). 
CONFLICT   448   454        RRFAGEL -> PLRRRV (in Ref. 1; BAA06232). 
Sequence information
Length: 492 AA [This is the length of the unprocessed precursor] Molecular weight: 56698 Da [This is the MW of the unprocessed precursor] CRC64: CB72C63598262AEF [This is a checksum on the sequence]
        10         20         30         40         50         60 
MDPCKFRPSS SFDTKTTTTN AGAPVWNDNE ALTVGPRGPI LLEDYHLIEK VAHFARERIP 

        70         80         90        100        110        120 
ERVVHARGAS AKGFFECTHD VTDITCADFL RSPGAQTPVI VRFSTVIHER GSPETIRDPR 

       130        140        150        160        170        180 
GFAVKFYTRE GNWDLLGNNF PVFFIRDGIK FPDVIHAFKP NPRSHVQEYW RVFDFLSHHP 

       190        200        210        220        230        240 
ESLHTFFFLF DDVGIPTDYR HMDGFGVNTY TFVTRDAKAR YVKFHWKPTC GVSCLMDDEA 

       250        260        270        280        290        300 
TLVGGKNHSH ATQDLYDSIA AGNFPEWKLF VQVIDPEEEE RFDFDPLDDT KTWPEDEVPL 

       310        320        330        340        350        360 
RPVGRLVLNR NVDNFFNENE QLAFGPGLVV PGIYYSDDKM LQCRVFAYAD TQRYRLGPNY 

       370        380        390        400        410        420 
LMLPVNAPKC AHHNNHYDGA MNFMHRDEEV DYYPSRHAPL RHAPPTPITP RPVVGRRQKA 

       430        440        450        460        470        480 
TIHKQNDFKQ PGERYRSWAP DRQERFIRRF AGELAHPKVS PELRAIWVNY LSQCDESLGV 

       490 
KIANRLNVKP SM 

Q0E4K1 in FASTA format

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