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UniProtKB/Swiss-Prot entry Q04336


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name YM54_YEAST
Primary accession number Q04336
Secondary accession numbers None
Integrated into Swiss-Prot on November 1, 1997
Sequence was last modified on November 1, 1997 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 51)
Name and origin of the protein
Protein name Uncharacterized protein YMR196W
Synonyms None
Gene name
OrderedLocusNames: YMR196W
ORFNames: YM9646.09
From
Saccharomyces cerevisiae (Baker's yeast) [TaxID: 4932] 
Taxonomy Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 204511 / S288c / AB972;
PubMed=9169872 [NCBI, ExPASy, EBI, Israel, Japan]
Bowman S., Churcher C.M., Badcock K., Brown D., Chillingworth T., Connor R., Dedman K., Devlin K., Gentles S., Hamlin N., Hunt S., Jagels K., Lye G., Moule S., Odell C., Pearson D., Rajandream M.A., Rice P., Skelton J., Walsh S.V., Whitehead S., Barrell B.G.;
"The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.";
Nature 387:90-93(1997).
[2]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-1013 AND SER-1020, AND MASS SPECTROMETRY.
DOI=10.1038/nbt0302-301; PubMed=11875433 [NCBI, ExPASy, EBI, Israel, Japan]
Ficarro S.B., McCleland M.L., Stukenberg P.T., Burke D.J., Ross M.M., Shabanowitz J., Hunt D.F., White F.M.;
"Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae.";
Nat. Biotechnol. 20:301-305(2002).
[3]
LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
DOI=10.1038/nature02046; PubMed=14562106 [NCBI, ExPASy, EBI, Israel, Japan]
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.;
"Global analysis of protein expression in yeast.";
Nature 425:737-741(2003).
[4]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1010, AND MASS SPECTROMETRY.
DOI=10.1073/pnas.0607084104; PubMed=17287358 [NCBI, ExPASy, EBI, Israel, Japan]
Chi A., Huttenhower C., Geer L.Y., Coon J.J., Syka J.E.P., Bai D.L., Shabanowitz J., Burke D.J., Troyanskaya O.G., Hunt D.F.;
"Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry.";
Proc. Natl. Acad. Sci. U.S.A. 104:2193-2198(2007).
[5]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-1008; SER-1010; THR-1013; SER-1016; SER-1017; SER-1019 AND SER-1020, AND MASS SPECTROMETRY.
DOI=10.1073/pnas.0701622104; PubMed=17563356 [NCBI, ExPASy, EBI, Israel, Japan]
Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H.;
"Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases.";
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007).
[6]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-299; SER-957; SER-963; THR-964; SER-966; SER-984; SER-1010; THR-1013; SER-1016; SER-1019; SER-1020 AND SER-1081, AND MASS SPECTROMETRY.
DOI=10.1074/mcp.M700468-MCP200; PubMed=18407956 [NCBI, ExPASy, EBI, Israel, Japan]
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
"A multidimensional chromatography technology for in-depth phosphoproteome analysis.";
Mol. Cell. Proteomics 7:1389-1396(2008).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Z47815; CAA87818.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S50925; S50925.
RefSeq NP_013923.1; -.
3D structure databases
ModBase Q04336.
Protein-protein interaction databases
DIP DIP:6550N; -.
IntAct Q04336; -.
Organism-specific databases
CYGD YMR196w; -.
SGD S000004809; YMR196W.
Yeast-GFP YMR196W.
Gene expression databases
ArrayExpress Q04336; -.
GermOnline YMR196W; Saccharomyces cerevisiae.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from direct assay from SGD).
GO:0003824; Molecular function: catalytic activity (inferred from electronic annotation from InterPro).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
ProtoNet Q04336.
Proteomic databases
PeptideAtlas Q04336; -.
Genome annotation databases
Ensembl YMR196W; Saccharomyces cerevisiae. [Contig view]
GeneID 855236; -.
GenomeReviews Z71257_GR; YMR196W.
KEGG sce:YMR196W; -.
NMPDR fig|4932.3.peg.4976; -.
Phylogenomic databases
HOGENOM Q04336; -.
Other
LinkHub Q04336; -.
NextBio 978780; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Phosphoprotein.
Features
SEVIEWER logo Feature table viewer
KeyFrom    To Length Description FTId
CHAIN   1   1088  1088     Uncharacterized protein YMR196W. PRO_0000203326
MOD_RES   299    299        Phosphoserine. 
MOD_RES   957    957        Phosphoserine. 
MOD_RES   963    963        Phosphoserine. 
MOD_RES   964    964        Phosphothreonine. 
MOD_RES   966    966        Phosphoserine. 
MOD_RES   984    984        Phosphoserine. 
MOD_RES   1008   1008        Phosphothreonine. 
MOD_RES   1010   1010        Phosphoserine. 
MOD_RES   1013   1013        Phosphothreonine. 
MOD_RES   1016   1016        Phosphoserine. 
MOD_RES   1017   1017        Phosphoserine. 
MOD_RES   1019   1019        Phosphoserine. 
MOD_RES   1020   1020        Phosphoserine. 
MOD_RES   1081   1081        Phosphoserine. 
Sequence information
Length: 1088 AA [This is the length of the unprocessed precursor] Molecular weight: 126624 Da [This is the MW of the unprocessed precursor] CRC64: 36C2B42BB2749687 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNKLRDKFVD STVEEERLRE NRNHEKYWYR WGPYLSERSW ATVREDYSLN GDAWSNFPFE 

        70         80         90        100        110        120 
HANARVFRWG EDGLFGVSDN KQLVCMNVAL WNGKDERLKE RLFGLTGPQG NHGEDVKELY 

       130        140        150        160        170        180 
FYLDNTPTHS YMKALYKYPF KKAFPYKELV QKNGERGYED KEFEVYDIDG LYRDSETGDN 

       190        200        210        220        230        240 
PYFDVFFEMA KDDENPSELN FRLTIHNRSK IDSGELYIAP QLFFRNTWAF DGTRTKDKPL 

       250        260        270        280        290        300 
LERDAEAANL INMTHKKYGN CQMVFQPSPG GFSSGTNEEE EDKEVEDIDP LLLFTDNESN 

       310        320        330        340        350        360 
LVKLFNEEKN PSEYTKDAFE EYLVQGKTDA VNPENKGTKA CAVYHFKNIP PGEYVTVRYK 

       370        380        390        400        410        420 
FTNDPKNSIF KAQNLAVVDE DEFDLIFDNR EEEADNFYWR ITPLPISDEL RNLQRQAFSG 

       430        440        450        460        470        480 
LLWTKQFYNF TYDAWYNGDA NVKPRPPPNR ANGRNKNWKH LYIEDILSMP DKWEYPFFAS 

       490        500        510        520        530        540 
WDTAFHCIPL AMIDPEFAKR QLDLLTREWY MHPNGQIPAY EWNFNDVNPP VHAWAVYRVF 

       550        560        570        580        590        600 
KIERNMYNRE DRTFLERVFQ KLLLNFTWWV NRKDTEGKNV FEGGFLGLDN IGVFNRSEPL 

       610        620        630        640        650        660 
PTGGTLEQAD STGWMAFFSL QMLNIALELA KENPVYEDIA SKFFEHFILI SDSMSFEYAT 

       670        680        690        700        710        720 
DITGEKCKEV IKQNLWNEAD KFYYDAISWG DHKVQLPIRS LVGLIPLYAS MTLEPSIIKQ 

       730        740        750        760        770        780 
FRGFKKRVDW FVNNRPEIFD RNIASMSKKG VGERLLLSLV TKERLTAILS RLLDETEFLS 

       790        800        810        820        830        840 
PYGIRSLSKY HEKHPFEMNV NGVEYMVKYL PGESDSGMFG GNSNWRGPIW FPTSFLIMEA 

       850        860        870        880        890        900 
LQRFYLYYGS DFKVECPVGS GDYLNLAEVA EELGYRMIHL FVPDENGERA IHYGDHSKFL 

       910        920        930        940        950        960 
SSDPYFRDYV PFFEYFDGDT GRGLGASHQC GWTALVAKWI SDVGISCVRL PRTPRSSVAT 

       970        980        990       1000       1010       1020 
TASTESSEQG PKMKRMARRK SAKSLVNYTA TILDLTEEEK RHHRIGGTHS GLTPQSSISS 

      1030       1040       1050       1060       1070       1080 
DKARHLMEEM NEEEGIHETV VPEDRHNFET KLIGKLKDKV KNMKVTDKAK DEDIDPMDPM 


SPLNKDVS 

Q04336 in FASTA format

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