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UniProtKB/Swiss-Prot entry Q01638


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ILRL1_HUMAN
Primary accession number Q01638
Secondary accession numbers Q53TU7 Q8NEJ3 Q9ULV7 Q9UQ44
Integrated into Swiss-Prot on April 1, 1993
Sequence was last modified on October 17, 2006 (Sequence version 4)
Annotations were last modified on    June 16, 2009 (Entry version 99)
Name and origin of the protein
Protein name Interleukin-1 receptor-like 1 [Precursor]
Synonym Protein ST2
Gene name
Name: IL1RL1
Synonyms: DER4, ST2, T1
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORM B), AND VARIANT GLU-78.
TISSUE=Lymphocyte;
DOI=10.1016/0167-4781(92)90125-J; PubMed=1482686 [NCBI, ExPASy, EBI, Israel, Japan]
Tominaga S., Yokota T., Yanagisawa K., Tsukamoto T., Takagi T., Tetsuka T.;
"Nucleotide sequence of a complementary DNA for human ST2.";
Biochim. Biophys. Acta 1171:215-218(1992).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM C), AND VARIANT GLU-78.
DOI=10.1006/bbrc.1999.1469; PubMed=10527832 [NCBI, ExPASy, EBI, Israel, Japan]
Tominaga S., Kuroiwa K., Tago K., Iwahana H., Yanagisawa K., Komatsu N.;
"Presence and expression of a novel variant form of ST2 gene product in human leukemic cell line UT-7/GM.";
Biochem. Biophys. Res. Commun. 264:14-18(1999).
[3]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM A), AND VARIANTS GLU-78 AND THR-433.
TISSUE=Megakaryoblast;
DOI=10.1006/geno.2000.6269; PubMed=10936050 [NCBI, ExPASy, EBI, Israel, Japan]
Li H., Tago K., Io K., Kuroiwa K., Arai T., Iwahana H., Tominaga S., Yanagisawa K.;
"The cloning and nucleotide sequence of human ST2L cDNA.";
Genomics 67:284-290(2000).
[4]
SEQUENCE REVISION TO 433.
Yanagisawa K.;
Submitted (JUN-2001) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1038/nature03466; PubMed=15815621 [NCBI, ExPASy, EBI, Israel, Japan]
Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H., Sun H., Bradshaw-Cordum H., Ali J., Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C., Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J., Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A., Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K., Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M., Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K., McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N., Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M., Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E., Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P., Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A., Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A., Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D., Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X., McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C., Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S., Miller W., Eichler E.E., Bork P., Suyama M., Torrents D., Waterston R.H., Wilson R.K.;
"Generation and annotation of the DNA sequences of human chromosomes 2 and 4.";
Nature 434:724-731(2005).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM B).
TISSUE=Placenta;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[7]
PROTEIN SEQUENCE OF 19-33.
DOI=10.1110/ps.04682504; PubMed=15340161 [NCBI, ExPASy, EBI, Israel, Japan]
Zhang Z., Henzel W.J.;
"Signal peptide prediction based on analysis of experimentally verified cleavage sites.";
Protein Sci. 13:2819-2824(2004).
[8]
SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
DOI=10.1006/bbrc.2001.5306; PubMed=11478810 [NCBI, ExPASy, EBI, Israel, Japan]
Tago K., Noda T., Hayakawa M., Iwahana H., Yanagisawa K., Yashiro T., Tominaga S.;
"Tissue distribution and subcellular localization of a variant form of the human ST2 gene product, ST2V.";
Biochem. Biophys. Res. Commun. 285:1377-1383(2001).
[9]
FUNCTION, AND SUBUNIT.
DOI=10.1016/j.immuni.2005.09.015; PubMed=16286016 [NCBI, ExPASy, EBI, Israel, Japan]
Schmitz J., Owyang A., Oldham E., Song Y., Murphy E., McClanahan T.K., Zurawski G., Moshrefi M., Qin J., Li X., Gorman D.M., Bazan J.F., Kastelein R.A.;
"IL-33, an interleukin-1-like cytokine that signals via the IL-1 receptor-related protein ST 2 and induces T helper type 2-associated cytokines.";
Immunity 23:479-490(2005).
[10]
SPLICE ISOFORM(S) THAT ARE POTENTIAL NMD TARGET(S).
DOI=10.1186/gb-2004-5-2-r8; PubMed=14759258 [NCBI, ExPASy, EBI, Israel, Japan]
Hillman R.T., Green R.E., Brenner S.E.;
"An unappreciated role for RNA surveillance.";
Genome Biol. 5:RESEARCH008.1-RESEARCH008.16(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
D12763; BAA02233.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D12764; BAA20539.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB029084; BAA85894.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB012701; BAA82405.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AC007248; AAY15047.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC030975; AAH30975.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00218676; -.
IPI00296161; -.
IPI00296164; -.
PIR JC7109; JC7109.
S30444; S30444.
RefSeq NP_003847.2; -.
NP_057316.3; -.
UniGene Hs.66
3D structure databases
ModBase Q01638.
Protein-protein interaction databases
IntAct Q01638; 4.
PTM databases
PhosphoSite Q01638; -.
Organism-specific databases
GeneCards GC02P102294; -.
H-InvDB HIX0002332; -.
HGNC HGNC:5998; IL1RL1.
GenAtlas IL1RL1.
HPA HPA007406; -.
HPA007917; -.
MIM 601203; gene. [NCBI / EBI]
PharmGKB PA29814; -.
Gene expression databases
ArrayExpress Q01638; -.
Bgee Q01638; -.
CleanEx HS_IL1RL1; -.
GermOnline ENSG00000115602; Homo sapiens.
Ontologies
GO
GO:0005813; Cellular component: centrosome (inferred from direct assay from HPA).
GO:0005576; Cellular component: extracellular region (inferred from electronic annotation from UniProtKB-KW).
GO:0005925; Cellular component: focal adhesion (inferred from direct assay from HPA).
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0004908; Molecular function: interleukin-1 receptor activity (inferred from electronic annotation from InterPro).
GO:0005057; Molecular function: receptor signaling protein activity (traceable author statement from ProtInc).
GO:0045087; Biological process: innate immune response (inferred from electronic annotation from InterPro).
GO:0007165; Biological process: signal transduction (traceable author statement from ProtInc).
QuickGo view.
Family and domain databases
InterPro IPR007110; Ig-like.
IPR013783; Ig-like_fold.
IPR013098; Ig_I-set.
IPR003599; Ig_sub.
IPR003598; Ig_sub2.
IPR013106; Ig_V-set.
IPR015621; IL1-receptor.
IPR004075; IL1_rcpt_1.
IPR004074; IL1_rcpt_I/II.
IPR000157; Toll-Interleukin_rcpt.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.10; Ig-like_fold; 3.
PANTHER PTHR11890; IL1-receptor; 1.
Pfam PF07679; I-set; 1.
PF01582; TIR; 1.
PF07686; V-set; 1.
Pfam graphical view of domain structure.
PRINTS PR01536; INTRLKN1R12F.
PR01537; INTRLKN1R1F.
SMART SM00409; IG; 1.
SM00408; IGc2; 1.
SM00255; TIR; 1.
SMART graphical view of domain structure.
PROSITE PS50835; IG_LIKE; 3.
PS50104; TIR; 1.
PROSITE graphical view of domain structure (profiles).
Proteomic databases
PRIDE Q01638; -.
Genome annotation databases
Ensembl ENSG00000115602; Homo sapiens. [Contig view]
GeneID 9173; -.
KEGG hsa:9173; -.
Phylogenomic databases
HOGENOM Q01638; -.
HOVERGEN Q01638; -.
OMA Q01638; EQEIALH.
Other
NextBio 34399; -.
SOURCE IL1RL1; Homo sapiens.
ProtoNet Q01638.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative splicing; Cell membrane; Direct protein sequencing; Disulfide bond; Glycoprotein; Immunoglobulin domain; Membrane; Polymorphism; Receptor; Repeat; Secreted; Signal; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    18  18      
CHAIN   19   556  538     Interleukin-1 receptor-like 1. PRO_0000015442
TOPO_DOM   19   328  310     Extracellular (Potential). 
TRANSMEM   329   349  21     Potential. 
TOPO_DOM   350   556  207     Cytoplasmic (Potential). 
DOMAIN   19   103  85     Ig-like C2-type 1. 
DOMAIN   114   197  84     Ig-like C2-type 2. 
DOMAIN   212   319  108     Ig-like C2-type 3. 
DOMAIN   375   538  164     TIR. 
CARBOHYD   54    54        N-linked (GlcNAc...) (Potential). 
CARBOHYD   95    95        N-linked (GlcNAc...) (Potential). 
CARBOHYD   101   101        N-linked (GlcNAc...) (Potential). 
CARBOHYD   140   140        N-linked (GlcNAc...) (Potential). 
CARBOHYD   191   191        N-linked (GlcNAc...) (Potential). 
CARBOHYD   232   232        N-linked (GlcNAc...) (Potential). 
CARBOHYD   254   254        N-linked (GlcNAc...) (Potential). 
CARBOHYD   273   273        N-linked (GlcNAc...) (Potential). 
DISULFID   36    87        By similarity. 
DISULFID   133   181        By similarity. 
DISULFID   235   303        By similarity. 
VAR_SEQ   204   259        DEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFGKGT QFLAAVLWQLNGTKIT -> VWCQSFCKLKKSLIFSNTHWIQSLMRGFVMVYYGVHKCCR VVFNLCLQYFQHHQWP (in isoform C). VSP_002664
VAR_SEQ   260   556        Missing (in isoform C). VSP_002665
VAR_SEQ   324   328        IDHHS -> SKECF (in isoform B). VSP_002666
VAR_SEQ   329   556        Missing (in isoform B). VSP_002667
VARIANT   78    78  1     A -> E (in dbSNP:rs1041973 [NCBI]). VAR_023749 
VARIANT   433   433  1     A -> T (in dbSNP:rs4988956 [NCBI]). VAR_053373 
VARIANT   501   501  1     Q -> K (in dbSNP:rs10192036 [NCBI]). VAR_053374 
VARIANT   501   501  1     Q -> R (in dbSNP:rs10204137 [NCBI]). VAR_053375 
VARIANT   549   549  1     T -> I (in dbSNP:rs10192157 [NCBI]). VAR_053376 
VARIANT   551   551  1     L -> S (in dbSNP:rs10206753 [NCBI]). VAR_053377 
CONFLICT   70    70        Q -> R (in Ref. 2; BAA85894). 
Sequence information
Length: 556 AA [This is the length of the unprocessed precursor] Molecular weight: 63358 Da [This is the MW of the unprocessed precursor] CRC64: CB3E444A2DD477B5 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGFWILAILT ILMYSTAAKF SKQSWGLENE ALIVRCPRQG KPSYTVDWYY SQTNKSIPTQ 

        70         80         90        100        110        120 
ERNRVFASGQ LLKFLPAAVA DSGIYTCIVR SPTFNRTGYA NVTIYKKQSD CNVPDYLMYS 

       130        140        150        160        170        180 
TVSGSEKNSK IYCPTIDLYN WTAPLEWFKN CQALQGSRYR AHKSFLVIDN VMTEDAGDYT 

       190        200        210        220        230        240 
CKFIHNENGA NYSVTATRSF TVKDEQGFSL FPVIGAPAQN EIKEVEIGKN ANLTCSACFG 

       250        260        270        280        290        300 
KGTQFLAAVL WQLNGTKITD FGEPRIQQEE GQNQSFSNGL ACLDMVLRIA DVKEEDLLLQ 

       310        320        330        340        350        360 
YDCLALNLHG LRRHTVRLSR KNPIDHHSIY CIIAVCSVFL MLINVLVIIL KMFWIEATLL 

       370        380        390        400        410        420 
WRDIAKPYKT RNDGKLYDAY VVYPRNYKSS TDGASRVEHF VHQILPDVLE NKCGYTLCIY 

       430        440        450        460        470        480 
GRDMLPGEDV VTAVETNIRK SRRHIFILTP QITHNKEFAY EQEVALHCAL IQNDAKVILI 

       490        500        510        520        530        540 
EMEALSELDM LQAEALQDSL QHLMKVQGTI KWREDHIANK RSLNSKFWKH VRYQMPVPSK 

       550 
IPRKASSLTP LAAQKQ 

Q01638 in FASTA format

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