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UniProtKB/Swiss-Prot entry P51639


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name HMDH_RAT
Primary accession number P51639
Secondary accession numbers Q64601 Q6P2A6
Integrated into Swiss-Prot on October 1, 1996
Sequence was last modified on October 31, 2006 (Sequence version 2)
Annotations were last modified on    November 4, 2008 (Entry version 75)
Name and origin of the protein
Protein name 3-hydroxy-3-methylglutaryl-coenzyme A reductase
Synonyms HMG-CoA reductase
EC 1.1.1.34
Gene name
Name: Hmgcr
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Hangjiong C., Williams D., Shapiro D.;
"Cloning and sequencing of rat 3-hydroxy-3-methylglutaryl coenzyme A reductase.";
Submitted (AUG-1994) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Prostate;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
NUCLEOTIDE SEQUENCE [MRNA] OF 644-887.
STRAIN=Sprague-Dawley;
TISSUE=Liver;
Khan S., Kabat S., Stambrook P.;
"Rat HMG-CoA reductase cDNA sequence contains an unusual 36 bp insert bounded by inverted repeats.";
Submitted (OCT-1990) to the EMBL/GenBank/DDBJ databases.
[4]
PROTEIN SEQUENCE OF 423-443 AND 867-878, AND PHOSPHORYLATION AT SER-871.
TISSUE=Liver;
PubMed=2369897 [NCBI, ExPASy, EBI, Israel, Japan]
Clarke P.R., Hardie D.G.;
"Regulation of HMG-CoA reductase: identification of the site phosphorylated by the AMP-activated protein kinase in vitro and in intact rat liver.";
EMBO J. 9:2439-2446(1990).
[5]
CHARACTERIZATION.
TISSUE=Liver;
PubMed=4019513 [NCBI, ExPASy, EBI, Israel, Japan]
Edwards P.A., Kempner E.S., Lan S.-F., Erickson S.K.;
"Functional size of rat hepatic 3-hydroxy-3-methylglutaryl coenzyme A reductase as determined by radiation inactivation.";
J. Biol. Chem. 260:10278-10282(1985).
[6]
PHOSPHORYLATION.
TISSUE=Liver;
DOI=10.1016/0014-5793(92)80837-7; PubMed=1628744 [NCBI, ExPASy, EBI, Israel, Japan]
Gillespie J.G., Hardie D.G.;
"Phosphorylation and inactivation of HMG-CoA reductase at the AMP-activated protein kinase site in response to fructose treatment of isolated rat hepatocytes.";
FEBS Lett. 306:59-62(1992).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M29249; AAA40608.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC064654; AAH64654.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X55286; CAA39001.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S33175; S33175.
RefSeq NP_037266.2; -.
UniGene Rn.9437
3D structure databases
HSSP P04035; 1HWJ. [HSSP ENTRY / PDB]
SMR P51639; 461-869.
ModBase P51639.
PTM databases
PhosphoSite P51639; -.
Organism-specific databases
RGD 2803; Hmgcr.
Gene expression databases
ArrayExpress P51639; -.
GermOnline ENSRNOG00000016122; Rattus norvegicus.
Ontologies
GO
GO:0006695; Biological process: cholesterol biosynthetic process (inferred from electronic annotation from UniProtKB-KW).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR002202; HMG_CoA_Rdtase_cat.
IPR004554; HMG_CoA_Rdtase_I_cat.
IPR004816; HMG_CoA_Rdtase_I_metazoan.
IPR000731; SSD_5TM.
Graphical view of domain structure.
Gene3D G3DSA:3.90.770.10; HMG-CoA_red; 1.
PANTHER PTHR10572; HMG-CoA_red; 1.
Pfam PF00368; HMG-CoA_red; 1.
Pfam graphical view of domain structure.
PRINTS PR00071; HMGCOARDTASE.
TIGRFAMs TIGR00920; 2A060605; 1.
TIGR00533; HMG_CoA_R_NADP; 1.
PROSITE PS00066; HMG_COA_REDUCTASE_1; 1.
PS00318; HMG_COA_REDUCTASE_2; 1.
PS01192; HMG_COA_REDUCTASE_3; 1.
PS50065; HMG_COA_REDUCTASE_4; 1.
PS50156; SSD; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P51639.
ProtoNet P51639.
Genome annotation databases
Ensembl ENSRNOG00000016122; Rattus norvegicus. [Contig view]
GeneID 25675; -.
KEGG rno:25675; -.
NMPDR fig|10116.3.peg.15387; -.
Phylogenomic databases
HOVERGEN P51639; -.
Other
NextBio 607623; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cholesterol biosynthesis; Direct protein sequencing; Endoplasmic reticulum; Glycoprotein; Lipid synthesis; Membrane; NADP; Oxidoreductase; Phosphoprotein; Steroid biosynthesis; Sterol biosynthesis; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   887  887     3-hydroxy-3-methylglutaryl-coenzyme A reductase. PRO_0000114424
TRANSMEM   10    39  30     Potential. 
TRANSMEM   57    78  22     Potential. 
TRANSMEM   90   114  25     Potential. 
TRANSMEM   124   149  26     Potential. 
TRANSMEM   160   187  28     Potential. 
TRANSMEM   192   220  29     Potential. 
TRANSMEM   315   339  25     Potential. 
REGION   340   449  110     Linker. 
REGION   450   887  438     Catalytic. 
ACT_SITE   558   558        Charge relay system (By similarity). 
ACT_SITE   690   690        Charge relay system (By similarity). 
ACT_SITE   766   766        Charge relay system (By similarity). 
ACT_SITE   865   865        Proton donor (By similarity). 
MOD_RES   871   871        Phosphoserine. 
CARBOHYD   281   281        N-linked (GlcNAc...) (Potential). 
CARBOHYD   517   517        N-linked (GlcNAc...) (Potential). 
CARBOHYD   869   869        N-linked (GlcNAc...) (Potential). 
CONFLICT   423   423        S -> T (in Ref. 4; AA sequence). 
CONFLICT   428   428        L -> V (in Ref. 4; AA sequence). 
CONFLICT   443   443        P -> N (in Ref. 4; AA sequence). 
CONFLICT   644   653        IRLQSKTGDA -> PIRSPKRGTS (in Ref. 3). 
CONFLICT   673   674        FF -> GV (in Ref. 1; AAA40608). 
CONFLICT   722   722        T -> S (in Ref. 3; CAA39001). 
CONFLICT   750   750        A -> L (in Ref. 1; AAA40608). 
CONFLICT   764   764        G -> A (in Ref. 3; CAA39001). 
Sequence information
Length: 887 AA [This is the length of the unprocessed precursor] Molecular weight: 96688 Da [This is the MW of the unprocessed precursor] CRC64: 856D99A9D5FA965C [This is a checksum on the sequence]
        10         20         30         40         50         60 
MLSRLFRMHG LFVASHPWEV IVGTVTLTIC MMSMNMFTGN NKICGWNYEC PKFEEDVLSS 

        70         80         90        100        110        120 
DIIILTITRC IAILYIYFQF QNLRQLGSKY ILGIAGLFTI FSSFVFSTVV IHFLDKELTG 

       130        140        150        160        170        180 
LNEALPFFLL LIDLSRASAL AKFALSSNSQ DEVRENIARG MAILGPTFTL DALVECLVIG 

       190        200        210        220        230        240 
VGTMSGVRQL EIMCCFGCMS VLANYFVFMT FFPACVSLVL ELSRESREGR PIWQLSHFAR 

       250        260        270        280        290        300 
VLEEEENKPN PVTQRVKMIM SLGLVLVHAH SRWIADPSPQ NSTAEQSKVS LGLAEDVSKR 

       310        320        330        340        350        360 
IEPSVSLWQF YLSKMISMDI EQVITLSLAL LLAVKYIFFE QAETESTLSL KNPITSPVVT 

       370        380        390        400        410        420 
PKKAQDNCCR REPLLVRRNQ KLSSVEEDPG VNQDRKVEVI KPLVAEAETS GRATFVLGAS 

       430        440        450        460        470        480 
AASPPLALGA QEPGIELPSE PRPNEECLQI LESAEKGAKF LSDAEIIQLV NAKHIPAYKL 

       490        500        510        520        530        540 
ETLMETHERG VSIRRQLLSA KLAEPSSLQY LPYRDYNYSL VMGACCENVI GYMPIPVGVA 

       550        560        570        580        590        600 
GPLCLDGKEY QVPMATTEGC LVASTNRGCR AISLGGGASS RVLADGMSRG PVVRLPRACD 

       610        620        630        640        650        660 
SAEVKSWLET PEGFAVVKEA FDSTSRFARL QKLHVTLAGR NLYIRLQSKT GDAMGMNMIS 

       670        680        690        700        710        720 
KGTEKALLKL QEFFPELQIL AVSGNYCTDK KPAAINWIEG RGKTVVCEAV IPAKVVREVL 

       730        740        750        760        770        780 
KTTTEAMVDV NINKNLVGSA MAGSIGGYNA HAANIVTAIY IACGQDAAQN VGSSNCITLM 

       790        800        810        820        830        840 
EASGPTNEDL YISCTMPSIE IGTVGGGTNL LPQQACLQML GVQGACKDNP GENARQLARI 

       850        860        870        880 
VCGTVMAGEL SLMAALAAGH LVRSHMVHNR SKINLQDLQG TCTKKAA 

P51639 in FASTA format

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View entry in raw text format (no links)
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