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UniProtKB/Swiss-Prot entry P51053


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DHSB_COXBU
Primary accession number P51053
Secondary accession numbers None
Integrated into Swiss-Prot on October 1, 1996
Sequence was last modified on October 1, 1996 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 66)
Name and origin of the protein
Protein name Succinate dehydrogenase iron-sulfur subunit
Synonym EC 1.3.99.1
Gene name
Name: sdhB
OrderedLocusNames: CBU_1400
From
Coxiella burnetii [TaxID: 777] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Coxiella.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=Nine Mile;
DOI=10.1016/0378-1119(94)00888-Y; PubMed=7698664 [NCBI, ExPASy, EBI, Israel, Japan]
Heinzen R.A., Mo Y.-Y., Robertson S.J., Mallavia L.P.;
"Characterization of the succinate dehydrogenase-encoding gene cluster (sdh) from the rickettsia Coxiella burnetii.";
Gene 155:27-34(1995).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=Nine Mile;
Thiele D., Willems H., Oswald W., Krauss H.;
Submitted (MAR-1994) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Nine Mile phase I / RSA 493;
DOI=10.1073/pnas.0931379100; PubMed=12704232 [NCBI, ExPASy, EBI, Israel, Japan]
Seshadri R., Paulsen I.T., Eisen J.A., Read T.D., Nelson K.E., Nelson W.C., Ward N.L., Tettelin H., Davidsen T.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Brinkac L.M., Madupu R., Dodson R.J., Khouri H.M., Lee K.H., Carty H.A., Scanlan D., Heinzen R.A., Thompson H.A., Samuel J.E., Fraser C.M., Heidelberg J.F.;
"Complete genome sequence of the Q-fever pathogen, Coxiella burnetii.";
Proc. Natl. Acad. Sci. U.S.A. 100:5455-5460(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
L33409; AAA74134.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X77919; CAA54873.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AE016828; AAO90899.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S42873; S42873.
RefSeq NP_820385.1; -.
3D structure databases
HSSP P07014; 1NEK. [HSSP ENTRY / PDB]
ModBase P51053.
Enzyme and pathway databases
BioCyc CBUR227377:CBU_1400-MON; -.
Ontologies
GO
GO:0051537; Molecular function: 2 iron, 2 sulfur cluster binding (inferred from electronic annotation from UniProtKB-KW).
GO:0051538; Molecular function: 3 iron, 4 sulfur cluster binding (inferred from electronic annotation from UniProtKB-KW).
GO:0051539; Molecular function: 4 iron, 4 sulfur cluster binding (inferred from electronic annotation from UniProtKB-KW).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0000104; Molecular function: succinate dehydrogenase activity (inferred from electronic annotation from EC).
GO:0022900; Biological process: electron transport chain (inferred from electronic annotation from UniProtKB-KW).
GO:0006810; Biological process: transport (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR001450; 4Fe4S_Fe_S_bd.
IPR014979; Acetone_carboxylase_gsu-rel.
IPR012675; b-grasp_ferredoxin-like.
IPR001041; Ferredoxin.
IPR012285; Fum_reductase_C.
IPR004489; Succ_DHase/fum_Rdtase_Fe-S.
Graphical view of domain structure.
Gene3D G3DSA:3.10.20.30; Ferredoxin_fold; 1.
G3DSA:1.10.1060.10; Fum_reductase_C; 1.
Pfam PF08882; Acetone_carb_G; 1.
PF00111; Fer2; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR00384; dhsB; 1.
PROSITE PS00198; 4FE4S_FER_1; 1.
PS51379; 4FE4S_FER_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P51053.
ProtoNet P51053.
Genome annotation databases
GeneID 1209306; -.
GenomeReviews AE016828_GR; CBU_1400.
KEGG cbu:CBU_1400; -.
NMPDR fig|227377.1.peg.1329; -.
TIGR CBU_1400; -.
Phylogenomic databases
HOGENOM P51053; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
2Fe-2S; 3Fe-4S; 4Fe-4S; Complete proteome; Electron transport; Iron; Iron-sulfur; Metal-binding; Oxidoreductase; Transport; Tricarboxylic acid cycle.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   235  235     Succinate dehydrogenase iron-sulfur subunit. PRO_0000158687
DOMAIN   133   163  31     4Fe-4S ferredoxin-type. 
METAL   53    53        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   58    58        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   61    61        Iron-sulfur 1 (2Fe-2S) (Potential). 
METAL   73    73        Iron-sulfur 1 (2Fe-2S) (By similarity). 
METAL   143   143        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   146   146        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   149   149        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   153   153        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   200   200        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   206   206        Iron-sulfur 3 (3Fe-4S) (By similarity). 
METAL   210   210        Iron-sulfur 2 (4Fe-4S) (By similarity). 
Sequence information
Length: 235 AA [This is the length of the unprocessed precursor] Molecular weight: 26847 Da [This is the MW of the unprocessed precursor] CRC64: 5949664A63BF5B41 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MTFSIMRFNP ETDKKPYMQD FELDVSAIQG KMLLNALEAL REKHPDIGLR RSCAEGVCGS 

        70         80         90        100        110        120 
DGMNINGKNA LACVTQLKDL PDRVVVRPLP GFPIIRDLIV DMEQFYAQYK KVKPYLLNDQ 

       130        140        150        160        170        180 
EAPQKERLQS PEERAKLDGL YECILCACCS SSCPSYWWNP DKFIGPAGLL WSYRFIADSR 

       190        200        210        220        230 
DSKEKERLDA MKDPYSVFRC RTIMDCATVC PKNLNPAKAI RKIRTEMLQE TESGE 

P51053 in FASTA format

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