ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry P30152

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name NGAL_RAT
Primary accession number P30152
Secondary accession numbers None
Integrated into Swiss-Prot on April 1, 1993
Sequence was last modified on April 1, 1993 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 58)
Name and origin of the protein
Protein name Neutrophil gelatinase-associated lipocalin [Precursor]
Synonyms NGAL
p25
Alpha-2-microglobulin-related protein
Alpha-2U globulin-related protein
Lipocalin-2
Gene name
Name: Lcn2
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 2: Evidence at transcript level;
References
[1]
 NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1093/nar/16.23.11368; PubMed=2462726 [NCBI, ExPASy, EBI, Israel, Japan]
Chan Y.-L., Paz V., Wool I.G.;
"The primary structure of rat alpha 2 mu globulin-related protein.";
Nucleic Acids Res. 16:11368-11368(1988).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X13295; CAA31657.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S01989; S01989.
RefSeq NP_570097.1; -.
UniGene Rn.11303
3D structure databases
HSSP P80188; 1L6M. [HSSP ENTRY / PDB]
ModBase P30152.
Organism-specific databases
RGD 69408; Lcn2.
Gene expression databases
ArrayExpress P30152; -.
GermOnline ENSRNOG00000013973; Rattus norvegicus.
Ontologies
GO
GO:0005576; Cellular component: extracellular region (inferred from electronic annotation from UniProtKB-KW).
GO:0005488; Molecular function: binding (inferred from electronic annotation from InterPro).
GO:0005215; Molecular function: transporter activity (inferred from electronic annotation from InterPro).
GO:0006810; Biological process: transport (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR012674; Calycin.
IPR002345; Lipocalin.
IPR000566; Lipocln_cytFABP.
IPR003087; N_gelatinase.
Graphical view of domain structure.
Gene3D G3DSA:2.40.128.20; Calycin; 1.
Pfam PF00061; Lipocalin; 1.
Pfam graphical view of domain structure.
PRINTS PR00179; LIPOCALIN.
PR01275; NGELATINASE.
PROSITE PS00213; LIPOCALIN; FALSE_NEG.
ProtoNet P30152.
Genome annotation databases
Ensembl ENSRNOG00000013973; Rattus norvegicus. [Contig view]
GeneID 170496; -.
KEGG rno:170496; -.
Phylogenomic databases
HOVERGEN P30152; -.
Other
NextBio 620993; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Glycoprotein; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
SIGNAL   1    20  20     By similarity. 
CHAIN   21   198  178     Neutrophil gelatinase-associated lipocalin. PRO_0000017935
CARBOHYD   85    85        N-linked (GlcNAc...) (Potential). 
DISULFID   96   195        By similarity. 
Sequence information
Length: 198 AA [This is the length of the unprocessed precursor] Molecular weight: 22559 Da [This is the MW of the unprocessed precursor] CRC64: 96C2F4ECFF26997B [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MGLGVLCLAL VLLGVLQRQA QDSTQNLIPA PPLISVPLQP GFWTERFQGR WFVVGLAANA 

        70         80         90        100        110        120 
VQKERQSRFT MYSTIYELQE DNSYNVTSIL VRGQGCRYWI RTFVPSSRPG QFTLGNIHSY 

       130        140        150        160        170        180 
PQIQSYDVQV ADTDYDQFAM VFFQKTSENK QYFKVTLYGR TKGLSDELKE RFVSFAKSLG 

       190 
LKDNNIVFSV PTDQCIDN
P30152 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA) 		Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by ca flag CBR Canada Mirror sites: Australia Brazil China Korea Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!