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UniProtKB/Swiss-Prot entry P25427


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NGF_RAT
Primary accession number P25427
Secondary accession numbers None
Integrated into Swiss-Prot on May 1, 1992
Sequence was last modified on February 1, 1996 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 60)
Name and origin of the protein
Protein name Beta-nerve growth factor [Precursor]
Synonym Beta-NGF
Gene name
Name: Ngf
Synonyms: Ngfb
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=3184206 [NCBI, ExPASy, EBI, Israel, Japan]
Whittemore S.R., Friedman P.L., Larhammar D.G., Persson H., Gonzalez-Carvajal M., Holets V.R.;
"Rat beta-nerve growth factor sequence and site of synthesis in the adult hippocampus.";
J. Neurosci. Res. 20:403-410(1988).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 178-219.
STRAIN=Sprague-Dawley;
TISSUE=Liver;
DOI=10.1016/0896-6273(91)90180-8; PubMed=2025430 [NCBI, ExPASy, EBI, Israel, Japan]
Hallboeoek F., Ibanez C.F., Persson H.;
"Evolutionary studies of the nerve growth factor family reveal a novel member abundantly expressed in Xenopus ovary.";
Neuron 6:845-858(1991).
Comments
  • FUNCTION: Nerve growth factor is important for the development and maintenance of the sympathetic and sensory nervous systems. It stimulates division and differentiation of sympathetic and embryonic sensory neurons.
  • SUBUNIT: Homodimer.
  • SUBCELLULAR LOCATION: Secreted.
  • SIMILARITY: Belongs to the NGF-beta family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M36589; AAA41697.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR I56570; I56570.
UniGene Rn.22168
3D structure databases
HSSP P01139; 1BET. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
SMR P25427; 129-239.
ModBase P25427.
Organism-specific databases
RGD 1598328; Ngfb.
Gene expression databases
ArrayExpress P25427; -.
GermOnline ENSRNOG00000016571; Rattus norvegicus.
Ontologies
GO
GO:0005788; Cellular component: endoplasmic reticulum lumen (inferred from experiment from Reactome).
GO:0005576; Cellular component: extracellular region (inferred from experiment from Reactome).
GO:0005796; Cellular component: Golgi lumen (inferred from experiment from Reactome).
QuickGo view.
Family and domain databases
InterPro IPR002072; NGF.
Graphical view of domain structure.
PANTHER PTHR11589; NGF; 1.
Pfam PF00243; NGF; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001789; NGF; 1.
PRINTS PR00268; NGF.
ProDom PD002052; NGF; 2.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00140; NGF; 1.
SMART graphical view of domain structure.
PROSITE PS00248; NGF_1; 1.
PS50270; NGF_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P25427.
Genome annotation databases
Ensembl ENSRNOG00000016571; Rattus norvegicus. [Contig view]
NMPDR fig|10116.3.peg.16731; -.
Phylogenomic databases
HOVERGEN P25427; -.
Other
ProtoNet P25427.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cleavage on pair of basic residues; Glycoprotein; Growth factor; Phosphoprotein; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    18  18     Potential. 
PROPEP   19   121  103     Potential. PRO_0000019609
CHAIN   122   241  120     Beta-nerve growth factor. PRO_0000019610
MOD_RES   84    84        Phosphoserine (By similarity). 
CARBOHYD   69    69        N-linked (GlcNAc...) (Potential). 
CARBOHYD   114   114        N-linked (GlcNAc...) (Potential). 
CARBOHYD   166   166        N-linked (GlcNAc...) (Potential). 
DISULFID   136   201        By similarity. 
DISULFID   179   229        By similarity. 
DISULFID   189   231        By similarity. 
Sequence information
Length: 241 AA [This is the length of the unprocessed precursor] Molecular weight: 27010 Da [This is the MW of the unprocessed precursor] CRC64: 665F42371563213D [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSMLFYTLIT AFLIGVQAEP YTDSNVPEGD SVPEAHWTKL QHSLDTALRR ARSAPAEPIA 

        70         80         90        100        110        120 
ARVTGQTRNI TVDPKLFKKR RLRSPRVLFS TQPPPTSSDT LDLDFQAHGT ISFNRTHRSK 

       130        140        150        160        170        180 
RSSTHPVFHM GEFSVCDSVS VWVGDKTTAT DIKGKEVTVL GEVNINNSVF KQYFFETKCR 

       190        200        210        220        230        240 
APNPVESGCR GIDSKHWNSY CTTTHTFVKA LTTDDKQAAW RFIRIDTACV CVLSRKAARR 


G 

P25427 in FASTA format

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