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UniProtKB/Swiss-Prot entry P20181


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NTF3_MOUSE
Primary accession number P20181
Secondary accession numbers None
Integrated into Swiss-Prot on February 1, 1991
Sequence was last modified on February 1, 1991 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 75)
Name and origin of the protein
Protein name Neurotrophin-3 [Precursor]
Synonyms NT-3
Neurotrophic factor
HDNF
Nerve growth factor 2
NGF-2
Gene name
Name: Ntf3
Synonyms: Ntf-3
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1038/344339a0; PubMed=2314473 [NCBI, ExPASy, EBI, Israel, Japan]
Hohn A., Leibrock J., Bailey K., Barde Y.-A.;
"Identification and characterization of a novel member of the nerve growth factor/brain-derived neurotrophic factor family.";
Nature 344:339-341(1990).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J;
TISSUE=Mammary gland;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
PROTEIN SEQUENCE OF 140-152.
PubMed=7957235 [NCBI, ExPASy, EBI, Israel, Japan]
Kolbeck R., Jungbluth S., Barde Y.-A.;
"Characterisation of neurotrophin dimers and monomers.";
Eur. J. Biochem. 225:995-1003(1994).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X53257; CAA37348.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC065785; AAH65785.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S09155; S09155.
RefSeq NP_032768.1; -.
UniGene Mm.267570
3D structure databases
HSSP P20783; 1NT3. [HSSP ENTRY / PDB]
SMR P20181; 147-254.
ModBase P20181.
Protein-protein interaction databases
DIP DIP:5721N; -.
Organism-specific databases
MGI MGI:97380; Ntf3.
Gene expression databases
ArrayExpress P20181; -.
CleanEx MM_NTF3; -.
GermOnline ENSMUSG00000049107; Mus musculus.
Ontologies
GO
GO:0016023; Cellular component: cytoplasmic membrane-bounded vesicle (inferred from direct assay from MGI).
GO:0005788; Cellular component: endoplasmic reticulum lumen (inferred from experiment from Reactome).
GO:0005166; Molecular function: neurotrophin p75 receptor binding (traceable author statement from MGI).
GO:0007411; Biological process: axon guidance (inferred from direct assay from MGI).
GO:0007420; Biological process: brain development (inferred from mutant phenotype from MGI).
GO:0048484; Biological process: enteric nervous system development (inferred from mutant phenotype from MGI).
GO:0008544; Biological process: epidermis development (inferred from mutant phenotype from MGI).
GO:0007403; Biological process: glial cell fate determination (inferred from mutant phenotype from MGI).
GO:0042490; Biological process: mechanoreceptor differentiation (inferred from genetic interaction from MGI).
GO:0021675; Biological process: nerve development (inferred from mutant phenotype from MGI).
GO:0007274; Biological process: neuromuscular synaptic transmission (inferred from direct assay from MGI).
GO:0007422; Biological process: peripheral nervous system development (inferred from mutant phenotype from MGI).
GO:0045944; Biological process: positive regulation of transcription from RNA polymerase II promoter (inferred from direct assay from MGI).
GO:0043523; Biological process: regulation of neuron apoptosis (inferred from direct assay from MGI).
GO:0051145; Biological process: smooth muscle cell differentiation (inferred from mutant phenotype from MGI).
QuickGo view.
Family and domain databases
InterPro IPR015578; Neurotrophin-3.
IPR002072; NGF.
Graphical view of domain structure.
PANTHER PTHR11589:SF4; Neurotrophin-3; 1.
PTHR11589; NGF; 1.
Pfam PF00243; NGF; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001789; NGF; 1.
PRINTS PR00268; NGF.
ProDom PD002052; NGF; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00140; NGF; 1.
SMART graphical view of domain structure.
PROSITE PS00248; NGF_1; 1.
PS50270; NGF_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P20181.
Genome annotation databases
Ensembl ENSMUSG00000049107; Mus musculus. [Contig view]
GeneID 18205; -.
KEGG mmu:18205; -.
Phylogenomic databases
HOVERGEN P20181; -.
Other
SOURCE Ntf3; Mus musculus.
ProtoNet P20181.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cleavage on pair of basic residues; Direct protein sequencing; Glycoprotein; Growth factor; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    18  18     Potential. 
PROPEP   19   139  121      PRO_0000019661
CHAIN   140   258  119     Neurotrophin-3. PRO_0000019662
CARBOHYD   131   131        N-linked (GlcNAc...) (Potential). 
DISULFID   153   218        By similarity. 
DISULFID   196   247        By similarity. 
DISULFID   206   249        By similarity. 
Sequence information
Length: 258 AA [This is the length of the unprocessed precursor] Molecular weight: 29588 Da [This is the MW of the unprocessed precursor] CRC64: 7180D064E8AE6042 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSILFYVIFL AYLRGIQGNS MDQRSLPEDS LNSLIIKLIQ ADILKNKLSK QMVDVKENYQ 

        70         80         90        100        110        120 
STLPKAEAPR EPEQGEATRS EFQPMIATDT ELLRQQRRYN SPRVLLSDST PLEPPPLYLM 

       130        140        150        160        170        180 
EDYVGNPVVA NRTSPRRKRY AEHKSHRGEY SVCDSESLWV TDKSSAIDIR GHQVTVLGEI 

       190        200        210        220        230        240 
KTGNSPVKQY FYETRCKEAR PVKNGCRGID DKHWNSQCKT SQTYVRALTS ENNKLVGWRW 

       250 
IRIDTSCVCA LSRKIGRT 

P20181 in FASTA format

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