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UniProtKB/Swiss-Prot entry P09038


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name FGF2_HUMAN
Primary accession number P09038
Secondary accession numbers A4LBB8 O00527 P78443 Q16443 Q5PY50 Q7KZ11 Q7KZ72 Q9UC54
Integrated into Swiss-Prot on November 1, 1988
Sequence was last modified on May 26, 2009 (Sequence version 2)
Annotations were last modified on    June 16, 2009 (Entry version 125)
Name and origin of the protein
Protein name Heparin-binding growth factor 2 [Precursor]
Synonyms HBGF-2
Basic fibroblast growth factor
BFGF
Gene name
Name: FGF2
Synonyms: FGFB
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=3472745 [NCBI, ExPASy, EBI, Israel, Japan]
Abraham J.A., Whang J.L., Tumolo A., Mergia A., Fiddes J.C.;
"Human basic fibroblast growth factor: nucleotide sequence, genomic organization, and expression in mammalian cells.";
Cold Spring Harb. Symp. Quant. Biol. 51:657-668(1986).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORM 2).
PubMed=3780670 [NCBI, ExPASy, EBI, Israel, Japan]
Abraham J.A., Whang J.L., Tumolo A., Mergia A., Friedman J., Gospodarowicz D., Fiddes J.C.;
"Human basic fibroblast growth factor: nucleotide sequence and genomic organization.";
EMBO J. 5:2523-2528(1986).
[3]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2).
DOI=10.1016/0014-5793(87)81489-8; PubMed=2435575 [NCBI, ExPASy, EBI, Israel, Japan]
Kurokawa T., Sasada R., Iwane M., Igarashi K.;
"Cloning and expression of cDNA encoding human basic fibroblast growth factor.";
FEBS Lett. 213:189-194(1987).
[4]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1; 2 AND 3), PROTEIN SEQUENCE OF 48-67, AND ALTERNATIVE INITIATION.
TISSUE=Hepatoma;
DOI=10.1073/pnas.86.6.1836; PubMed=2538817 [NCBI, ExPASy, EBI, Israel, Japan]
Prats H., Kaghad M., Prats A.C., Klagsbrun M., Lelias J.M., Liauzun P., Chalon P., Tauber J.P., Amalric F., Smith J.A., Caput D.;
"High molecular mass forms of basic fibroblast growth factor are initiated by alternative CUG codons.";
Proc. Natl. Acad. Sci. U.S.A. 86:1836-1840(1989).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
DOI=10.1038/nmeth.1273; PubMed=19054851 [NCBI, ExPASy, EBI, Israel, Japan]
Goshima N., Kawamura Y., Fukumoto A., Miura A., Honma R., Satoh R., Wakamatsu A., Yamamoto J., Kimura K., Nishikawa T., Andoh T., Iida Y., Ishikawa K., Ito E., Kagawa N., Kaminaga C., Kanehori K., Kawakami B., Kenmochi K., Kimura R., Kobayashi M., Kuroita T., Kuwayama H., Maruyama Y., Matsuo K., Minami K., Mitsubori M., Mori M., Morishita R., Murase A., Nishikawa A., Nishikawa S., Okamoto T., Sakagami N., Sakamoto Y., Sasaki Y., Seki T., Sono S., Sugiyama A., Sumiya T., Takayama T., Takayama Y., Takeda H., Togashi T., Yahata K., Yamada H., Yanagisawa Y., Endo Y., Imamoto F., Kisu Y., Tanaka S., Isogai T., Imai J., Watanabe S., Nomura N.;
"Human protein factory for converting the transcriptome into an in vitro-expressed proteome.";
Nat. Methods 5:1011-1017(2008).
[6]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
NIEHS SNPs program;
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
[7]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C.;
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
[8]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-114.
DOI=10.1111/j.1749-6632.1991.tb49022.x; PubMed=1785797 [NCBI, ExPASy, EBI, Israel, Japan]
Florkiewicz R.Z., Shibata F., Barankiewicz T., Baird A., Gonzalez A.M., Florkiewicz E., Shah N.;
"Basic fibroblast growth factor gene expression.";
Ann. N. Y. Acad. Sci. 638:109-126(1991).
[9]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-114.
TISSUE=Blood;
Handschug K., Archoukieh E., Glaeser C.;
"Mutations in the 5' untranslated region of the FGF-2 gene.";
Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases.
[10]
PROTEIN SEQUENCE OF 47-62 (ISOFORMS 1/3).
PubMed=8564983 [NCBI, ExPASy, EBI, Israel, Japan]
Izbicka E., Dunstan C., Esparza J., Jacobs C., Sabatini M., Mundy G.R.;
"Human amniotic tumor that induces new bone formation in vivo produces growth-regulatory activity in vitro for osteoblasts identified as an extended form of basic fibroblast growth factor.";
Cancer Res. 56:633-636(1996).
[11]
NUCLEOTIDE SEQUENCE [MRNA] OF 54-210 (ISOFORMS 1/3), AND PROTEIN SEQUENCE OF 54-70; 75-82; 87-169; 174-183 AND 189-210 (ISOFORMS 1/3).
TISSUE=Hepatoma, and Placenta;
DOI=10.1016/S0006-291X(87)80001-3; PubMed=3579930 [NCBI, ExPASy, EBI, Israel, Japan]
Sommer A., Brewer M.T., Thompson R.C., Moscatelli D., Presta M., Rifkin D.B.;
"A form of human basic fibroblast growth factor with an extended amino terminus.";
Biochem. Biophys. Res. Commun. 144:543-550(1987).
[12]
PROTEIN SEQUENCE OF 57-77.
DOI=10.1016/0006-291X(87)91471-9; PubMed=2435284 [NCBI, ExPASy, EBI, Israel, Japan]
Story M.T., Esch F., Shimasaki S., Sasse J., Jacobs S.C., Lawson R.K.;
"Amino-terminal sequence of a large form of basic fibroblast growth factor isolated from human benign prostatic hyperplastic tissue.";
Biochem. Biophys. Res. Commun. 142:702-709(1987).
[13]
NUCLEOTIDE SEQUENCE [MRNA] OF 95-182 (ISOFORMS 1/2/3), AND TISSUE SPECIFICITY.
DOI=10.1016/0006-291X(92)90434-M; PubMed=1417798 [NCBI, ExPASy, EBI, Israel, Japan]
Watson R., Anthony F., Pickett M., Lambden P., Masson G.M., Thomas E.J.;
"Reverse transcription with nested polymerase chain reaction shows expression of basic fibroblast growth factor transcripts in human granulosa and cumulus cells from in vitro fertilisation patients.";
Biochem. Biophys. Res. Commun. 187:1227-1231(1992).
[14]
NUCLEOTIDE SEQUENCE [MRNA] OF 65-210 (ISOFORMS 1/2/3).
Zhang H.J., Zhang S.M., Zhuang H.;
Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
[15]
PROTEIN SEQUENCE OF 65-94.
DOI=10.1016/0006-291X(86)90028-8; PubMed=3964259 [NCBI, ExPASy, EBI, Israel, Japan]
Gimenez-Gallego G., Conn G., Hatcher V.B., Thomas K.A.;
"Human brain-derived acidic and basic fibroblast growth factors: amino terminal sequences and specific mitogenic activities.";
Biochem. Biophys. Res. Commun. 135:541-548(1986).
[16]
PROTEIN SEQUENCE OF 65-90.
DOI=10.1016/0014-5793(86)80812-2; PubMed=3732516 [NCBI, ExPASy, EBI, Israel, Japan]
Gautschi P., Frater-Schroeder M., Boehlen P.;
"Partial molecular characterization of endothelial cell mitogens from human brain: acidic and basic fibroblast growth factors.";
FEBS Lett. 204:203-207(1986).
[17]
IDENTIFICATION IN A COMPLEX WITH FGFBP1 AND FGF1.
PubMed=1885605 [NCBI, ExPASy, EBI, Israel, Japan]
Wu D.Q., Kan M.K., Sato G.H., Okamoto T., Sato J.D.;
"Characterization and molecular cloning of a putative binding protein for heparin-binding growth factors.";
J. Biol. Chem. 266:16778-16785(1991).
[18]
INTERACTION WITH CSPG4.
DOI=10.1074/jbc.274.24.16831; PubMed=10358027 [NCBI, ExPASy, EBI, Israel, Japan]
Goretzki L., Burg M.A., Grako K.A., Stallcup W.B.;
"High-affinity binding of basic fibroblast growth factor and platelet-derived growth factor-AA to the core protein of the NG2 proteoglycan.";
J. Biol. Chem. 274:16831-16837(1999).
[19]
INTERACTION WITH FGFBP1.
DOI=10.1074/jbc.M104933200; PubMed=11509569 [NCBI, ExPASy, EBI, Israel, Japan]
Tassi E., Al-Attar A., Aigner A., Swift M.R., McDonnell K., Karavanov A., Wellstein A.;
"Enhancement of fibroblast growth factor (FGF) activity by an FGF-binding protein.";
J. Biol. Chem. 276:40247-40253(2001).
[20]
INTERACTION WITH FGFBP1.
DOI=10.1074/jbc.M510754200; PubMed=16257968 [NCBI, ExPASy, EBI, Israel, Japan]
Xie B., Tassi E., Swift M.R., McDonnell K., Bowden E.T., Wang S., Ueda Y., Tomita Y., Riegel A.T., Wellstein A.;
"Identification of the fibroblast growth factor (FGF)-interacting domain in a secreted FGF-binding protein by phage display.";
J. Biol. Chem. 281:1137-1144(2006).
[21]
X-RAY CRYSTALLOGRAPHY (1.6 ANGSTROMS).
PubMed=1769963 [NCBI, ExPASy, EBI, Israel, Japan]
Ago H., Kitagawa Y., Fujishima A., Matsuura Y., Katsube Y.;
"Crystal structure of basic fibroblast growth factor at 1.6-A resolution.";
J. Biochem. 110:360-363(1991).
[22]
X-RAY CRYSTALLOGRAPHY (2.2 ANGSTROMS).
DOI=10.1073/pnas.88.8.3441; PubMed=1707542 [NCBI, ExPASy, EBI, Israel, Japan]
Eriksson A.E., Cousens L.S., Weaver L.H., Matthews B.W.;
"Three-dimensional structure of human basic fibroblast growth factor.";
Proc. Natl. Acad. Sci. U.S.A. 88:3441-3445(1991).
[23]
X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS).
DOI=10.1073/pnas.88.8.3446; PubMed=1849658 [NCBI, ExPASy, EBI, Israel, Japan]
Zhang J., Cousens L.S., Barr P.J., Sprang S.R.;
"Three-dimensional structure of human basic fibroblast growth factor, a structural homolog of interleukin 1 beta.";
Proc. Natl. Acad. Sci. U.S.A. 88:3446-3450(1991).
[24]
X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS).
DOI=10.1126/science.1702556; PubMed=1702556 [NCBI, ExPASy, EBI, Israel, Japan]
Zhu X., Komiya H., Chirino A., Faham S., Fox G.M., Arakawa T., Hsu B.T., Rees D.C.;
"Three-dimensional structures of acidic and basic fibroblast growth factors.";
Science 251:90-93(1991).
[25]
X-RAY CRYSTALLOGRAPHY (1.6 ANGSTROMS).
PubMed=7691311 [NCBI, ExPASy, EBI, Israel, Japan]
Eriksson A.E., Cousens L.S., Matthews B.W.;
"Refinement of the structure of human basic fibroblast growth factor at 1.6-A resolution and analysis of presumed heparin binding sites by selenate substitution.";
Protein Sci. 2:1274-1284(1993).
[26]
X-RAY CRYSTALLOGRAPHY (2.7 ANGSTROMS) OF 79-210 IN COMPLEX WITH FGFR2.
DOI=10.1073/pnas.121183798; PubMed=11390973 [NCBI, ExPASy, EBI, Israel, Japan]
Ibrahimi O.A., Eliseenkova A.V., Plotnikov A.N., Yu K., Ornitz D.M., Mohammadi M.;
"Structural basis for fibroblast growth factor receptor 2 activation in Apert syndrome.";
Proc. Natl. Acad. Sci. U.S.A. 98:7182-7187(2001).
[27]
STRUCTURE BY NMR.
DOI=10.1021/bi961260p; PubMed=8885834 [NCBI, ExPASy, EBI, Israel, Japan]
Moy F.J., Seddon A.P., Boehlen P., Powers R.;
"High-resolution solution structure of basic fibroblast growth factor determined by multidimensional heteronuclear magnetic resonance spectroscopy.";
Biochemistry 35:13552-13561(1996).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X04431; CAA28027.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X04432; CAA28028.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X04433; CAA28029.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M27968; AAA52448.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
J04513; AAA52531.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
J04513; AAA52532.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
J04513; AAA52533.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB451321; BAG70135.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB451450; BAG70264.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EF506888; ABO43041.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CH471056; EAX05222.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
S81809; AAB21432.2; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Y13468; CAA73868.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M17599; AAA52534.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY820133; AAV70487.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
S47380; AAD13853.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00154603; -.
PIR A32398; A32398.
RefSeq NP_001997.5; -.
UniGene Hs.284244
3D structure databases
PDB
1BAS; X-ray; 1.90 A; A=57-210.[ExPASy / RCSB / EBI]
1BFB; X-ray; 1.90 A; A=64-210.[ExPASy / RCSB / EBI]
1BFC; X-ray; 2.20 A; A=64-210.[ExPASy / RCSB / EBI]
1BFF; X-ray; 2.00 A; A=82-210.[ExPASy / RCSB / EBI]
1BFG; X-ray; 1.60 A; A=65-210.[ExPASy / RCSB / EBI]
1BLA; NMR; -; A=56-210.[ExPASy / RCSB / EBI]
1BLD; NMR; -; A=56-210.[ExPASy / RCSB / EBI]
1CVS; X-ray; 2.80 A; A/B=79-210.[ExPASy / RCSB / EBI]
1EV2; X-ray; 2.20 A; A/B/C/D=79-210.[ExPASy / RCSB / EBI]
1FGA; X-ray; 2.20 A; A=65-210.[ExPASy / RCSB / EBI]
1FQ9; X-ray; 3.00 A; A/B=79-210.[ExPASy / RCSB / EBI]
1II4; X-ray; 2.70 A; A/B/C/D=56-210.[ExPASy / RCSB / EBI]
1IIL; X-ray; 2.30 A; A/B/C/D=56-210.[ExPASy / RCSB / EBI]
2BFH; X-ray; 2.50 A; A=83-210.[ExPASy / RCSB / EBI]
2FGF; X-ray; 1.77 A; A=65-210.[ExPASy / RCSB / EBI]
4FGF; X-ray; 1.60 A; A=65-210.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1BAS; -.
1BFB; -.
1BFC; -.
1BFF; -.
1BFG; -.
1BLA; -.
1BLD; -.
1CVS; -.
1EV2; -.
1FGA; -.
1FQ9; -.
1II4; -.
1IIL; -.
2BFH; -.
2FGF; -.
4FGF; -.
ModBase P09038.
Protein-protein interaction databases
DIP DIP:4012N; -.
IntAct P09038; 5.
Enzyme and pathway databases
Pathway_Interaction_DB angiopoietinreceptor_pathway; Angiopoietin receptor Tie2-mediated signaling.
fgf_pathway; FGF signaling pathway.
glypican_1pathway; Glypican 1 network.
avb3_integrin_pathway; Integrins in angiogenesis.
syndecan_4_pathway; Syndecan-4-mediated signaling events.
Reactome REACT_9470; Signaling by FGFR.
Organism-specific databases
GeneCards GC04P124027; -.
H-InvDB HIX0031422; -.
HGNC HGNC:3676; FGF2.
GenAtlas FGF2.
HPA CAB000125; -.
MIM 134920; gene. [NCBI / EBI]
PharmGKB PA28115; -.
Gene expression databases
ArrayExpress P09038; -.
Bgee P09038; -.
CleanEx HS_FGF2; -.
GermOnline ENSG00000138685; Homo sapiens.
Ontologies
GO
GO:0005615; Cellular component: extracellular space (traceable author statement from ProtInc).
GO:0008083; Molecular function: growth factor activity (inferred from electronic annotation from UniProtKB-KW).
GO:0008201; Molecular function: heparin binding (inferred from electronic annotation from UniProtKB-KW).
GO:0000187; Biological process: activation of MAPK activity (traceable author statement from ProtInc).
GO:0001525; Biological process: angiogenesis (inferred from electronic annotation from UniProtKB-KW).
GO:0008283; Biological process: cell proliferation (inferred from electronic annotation from UniProtKB-KW).
GO:0006935; Biological process: chemotaxis (traceable author statement from ProtInc).
GO:0008543; Biological process: fibroblast growth factor receptor signaling pathway (inferred from experiment from Reactome).
GO:0043537; Biological process: negative regulation of blood vessel endothelial cell migration (inferred from direct assay from UniProtKB).
GO:0043536; Biological process: positive regulation of blood vessel endothelial cell migration (inferred from direct assay from UniProtKB).
GO:0060045; Biological process: positive regulation of cardiac muscle cell proliferation (inferred from direct assay from UniProtKB).
GO:0007265; Biological process: Ras protein signal transduction (traceable author statement from ProtInc).
QuickGo view.
Family and domain databases
ProDom PD000831; IL1_HBGF; 1.
[Domain structure / List of seq. sharing at least 1 domain]
PROSITE PS00247; HBGF_FGF; 1.
Other
SWISS-3DIMAGE P09038.
Proteomic databases
PRIDE P09038; -.
Genome annotation databases
Ensembl ENSG00000138685; Homo sapiens. [Contig view]
GeneID 2247; -.
KEGG hsa:2247; -.
Phylogenomic databases
HOVERGEN P09038; -.
Other
DrugBank DB00686; Pentosan Polysulfate.
NextBio 9095; -.
SOURCE FGF2; Homo sapiens.
ProtoNet P09038.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Alternative initiation; Angiogenesis; Developmental protein; Differentiation; Direct protein sequencing; Growth factor; Heparin-binding; Mitogen.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
PROPEP   1    64  64     Or 47, or 53, or 46. PRO_0000008932
CHAIN   65   210  146     Heparin-binding growth factor 2. PRO_0000008933
REGION   183   199  17     Heparin-binding (By similarity). 
MOTIF   101   103  3     Cell attachment site; atypical (Potential). 
MOTIF   143   145  3     Cell attachment site; atypical (Potential). 
BINDING   91    91        Heparin (By similarity). 
VAR_SEQ   1    55        Missing (in isoform 2). VSP_037383
VAR_SEQ   1    14        Missing (in isoform 3). VSP_037384
VAR_SEQ   15    15        L -> M (in isoform 3). VSP_037385
STRAND   85    89  5      
TURN   90    93  4      
STRAND   94    98  5      
STRAND   104   107  4      
HELIX   113   115  3      
STRAND   117   123  7      
STRAND   126   131  6      
TURN   132   135  4      
STRAND   136   140  5      
STRAND   146   151  6      
HELIX   154   156  3      
STRAND   158   162  5      
STRAND   168   175  8      
STRAND   186   188  3      
HELIX   191   193  3      
HELIX   199   201  3      
STRAND   203   206  4      
Sequence information
Length: 210 AA [This is the length of the unprocessed precursor] Molecular weight: 22623 Da [This is the MW of the unprocessed precursor] CRC64: A21C7A6E82E4F5BD [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGDRGRGRAL PGGRLGGRGR GRAPERVGGR GRGRGTAAPR AAPAARGSRP GPAGTMAAGS 

        70         80         90        100        110        120 
ITTLPALPED GGSGAFPPGH FKDPKRLYCK NGGFFLRIHP DGRVDGVREK SDPHIKLQLQ 

       130        140        150        160        170        180 
AEERGVVSIK GVCANRYLAM KEDGRLLASK CVTDECFFFE RLESNNYNTY RSRKYTSWYV 

       190        200        210 
ALKRTGQYKL GSKTGPGQKA ILFLPMSAKS 

P09038 in FASTA format

View entry in raw text format (no links)
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BLAST logo BLAST submission on ExPASy/SIB
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