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UniProtKB/Swiss-Prot entry O88554


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PARP2_MOUSE
Primary accession number O88554
Secondary accession number Q99N29
Integrated into Swiss-Prot on September 26, 2001
Sequence was last modified on September 26, 2001 (Sequence version 3)
Annotations were last modified on    November 25, 2008 (Entry version 79)
Name and origin of the protein
Protein name Poly [ADP-ribose] polymerase 2
Synonyms PARP-2
EC 2.4.2.30
NAD(+) ADP-ribosyltransferase 2
Poly[ADP-ribose] synthetase 2
pADPRT-2
mPARP-2
Gene name
Name: Parp2
Synonyms: Adprt2, Adprtl2, Aspartl2
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND CHARACTERIZATION.
TISSUE=Embryo;
DOI=10.1074/jbc.274.25.17860; PubMed=10364231 [NCBI, ExPASy, EBI, Israel, Japan]
Ame J.-C., Rolli V., Schreiber V., Niedergang C., Apiou F., Decker P., Muller S., Hoeger T., Menissier-de Murcia J., de Murcia G.M.;
"PARP-2, a novel mammalian DNA damage-dependent poly(ADP-ribose) polymerase.";
J. Biol. Chem. 274:17860-17868(1999).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=129/Sv;
DOI=10.1074/jbc.M007870200; PubMed=11133988 [NCBI, ExPASy, EBI, Israel, Japan]
Ame J.-C., Schreiber V., Fraulob V., Dolle P., de Murcia G.M., Niedergang C.P.;
"A bidirectional promoter connects the poly(ADP-ribose) polymerase 2 (PARP-2) gene to the gene for RNase P RNA. Structure and expression of the mouse PARP-2 gene.";
J. Biol. Chem. 276:11092-11099(2001).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Embryo;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
NUCLEOTIDE SEQUENCE [MRNA] OF 9-559.
STRAIN=C57BL/6 X 129/Sv;
DOI=10.1016/S0014-5793(99)00448-2; PubMed=10338144 [NCBI, ExPASy, EBI, Israel, Japan]
Berghammer H., Ebner M., Marksteiner R., Auer B.;
"pADPRT-2: a novel mammalian polymerizing(ADP-ribosyl)transferase gene related to truncated pADPRT homologues in plants and Caenorhabditis elegans.";
FEBS Lett. 449:259-263(1999).
[5]
INTERACTION WITH PARP1; XRCC1; POLB AND LIG3, AND POLY-ADP-RIBOSYLATION.
DOI=10.1074/jbc.M202390200; PubMed=11948190 [NCBI, ExPASy, EBI, Israel, Japan]
Schreiber V., Ame J.-C., Dolle P., Schultz I., Rinaldi B., Fraulob V., Menissier-de Murcia J., de Murcia G.M.;
"Poly(ADP-ribose) polymerase-2 (PARP-2) is required for efficient base excision DNA repair in association with PARP-1 and XRCC1.";
J. Biol. Chem. 277:23028-23036(2002).
Comments
  • FUNCTION: Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks.
  • CATALYTIC ACTIVITY: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.
  • SUBUNIT: Component of a base excision repair (BER) complex, containing at least XRCC1, PARP1, POLB and LIG3. Homo- and heterodimer with PARP1.
  • SUBCELLULAR LOCATION: Nucleus.
  • TISSUE SPECIFICITY: Widely expressed; the highest levels were in testis followed by ovary. Expression is correlated with proliferation, with higher levels occurring during early fetal development and organogenesis and in the highly proliferative cell compartments of adult.
  • DEVELOPMENTAL STAGE: At stage E12.5, expressed at high level in the developing liver and kidneys. At E18.5, preferentially expressed in the thymus and in regions of the nervous system. Within the developing trunk, preferential expression persisted in the liver and became restricted to the cortical region of the kidney, spleen, adrenal gland, and to stomach and intestinal epithelia. From E14.5 to E18.5, as well as in the adult, expressed at the highest level in thymus. Expression is particularly high in the subcapsular zone of the thymus where immature lymphocytes proliferate.
  • INDUCTION: By high levels of DNA-damaging agents.
  • PTM: Poly-ADP-ribosylated by PARP1.
  • SIMILARITY: Contains 1 PARP alpha-helical domain.
  • SIMILARITY: Contains 1 PARP catalytic domain.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AJ007780; CAA07679.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF191547; AAK13253.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC062150; AAH62150.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF072521; AAC25415.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_033762.1; -.
UniGene Mm.281482
3D structure databases
PDB
1GS0; X-ray; 2.80 A; A/B=207-557.[ExPASy / RCSB / EBI]
PDBsum 1GS0; -.
ModBase O88554.
PTM databases
PhosphoSite O88554; -.
Organism-specific databases
MGI MGI:1341112; Parp2.
Gene expression databases
ArrayExpress O88554; -.
CleanEx MM_PARP2; -.
GermOnline ENSMUSG00000036023; Mus musculus.
Ontologies
GO
GO:0005634; Cellular component: nucleus (inferred from direct assay from MGI).
GO:0003677; Molecular function: DNA binding (inferred from electronic annotation from UniProtKB-KW).
GO:0003950; Molecular function: NAD+ ADP-ribosyltransferase activity (inferred from direct assay from MGI).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from MGI).
GO:0006284; Biological process: base-excision repair (inferred from mutant phenotype from MGI).
GO:0006471; Biological process: protein amino acid ADP-ribosylation (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR012317; PARP_catalytic.
IPR004102; PARP_reg.
IPR008893; WGR.
Graphical view of domain structure.
Gene3D G3DSA:1.20.142.10; PARP_reg; 1.
Pfam PF00644; PARP; 1.
PF02877; PARP_reg; 1.
PF05406; WGR; 1.
Pfam graphical view of domain structure.
SMART SM00773; WGR; 1.
SMART graphical view of domain structure.
PROSITE PS51060; PARP_ALPHA_HD; 1.
PS51059; PARP_CATALYTIC; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet O88554.
Genome annotation databases
Ensembl ENSMUSG00000036023; Mus musculus. [Contig view]
GeneID 11546; -.
KEGG mmu:11546; -.
Phylogenomic databases
HOGENOM O88554; -.
HOVERGEN O88554; -.
Other
NextBio 279022; -.
SOURCE Parp2; Mus musculus.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; DNA-binding; Glycosyltransferase; NAD; Nucleus; Transferase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   559  559     Poly [ADP-ribose] polymerase 2. PRO_0000211328
DOMAIN   207   324  118     PARP alpha-helical. 
DOMAIN   332   559  228     PARP catalytic. 
DNA_BIND   1    65  65     Potential. 
MOTIF   3     9  7     Nuclear localization signal (Potential). 
MOTIF   33    39  7     Nuclear localization signal (Potential). 
CONFLICT   82    82        L -> V (in Ref. 2; AAK13253). 
CONFLICT   177   177        V -> I (in Ref. 2; AAK13253). 
CONFLICT   486   486        R -> Q (in Ref. 2; AAK13253). 
HELIX   212   222  11      
HELIX   224   232  9      
TURN   233   235  3      
STRAND   238   241  4      
HELIX   243   245  3      
HELIX   248   266  19      
HELIX   272   284  13      
HELIX   300   320  21      
HELIX   333   340  8      
STRAND   343   347  5      
HELIX   353   364  12      
STRAND   372   385  14      
HELIX   388   391  4      
STRAND   399   406  8      
HELIX   408   410  3      
HELIX   411   417  7      
STRAND   424   426  3      
HELIX   428   430  3      
STRAND   434   441  8      
HELIX   443   447  5      
HELIX   448   450  3      
STRAND   454   456  3      
STRAND   458   467  10      
STRAND   470   476  7      
HELIX   481   484  4      
STRAND   489   493  5      
STRAND   496   498  3      
HELIX   501   503  3      
STRAND   505   507  3      
STRAND   510   512  3      
STRAND   525   527  3      
STRAND   534   538  5      
HELIX   540   542  3      
STRAND   543   555  13      
Sequence information
Length: 559 AA [This is the length of the unprocessed precursor] Molecular weight: 63397 Da [This is the MW of the unprocessed precursor] CRC64: E0AEDAEE412C1445 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAPRRQRSGS GRRVLNEAKK VDNGNKATED DSPPGKKMRT CQRKGPMAGG KDADRTKDNR 

        70         80         90        100        110        120 
DSVKTLLLKG KAPVDPECAA KLGKAHVYCE GDDVYDVMLN QTNLQFNNNK YYLIQLLEDD 

       130        140        150        160        170        180 
AQRNFSVWMR WGRVGKTGQH SLVTCSGDLN KAKEIFQKKF LDKTKNNWED RENFEKVPGK 

       190        200        210        220        230        240 
YDMLQMDYAA STQDESKTKE EETLKPESQL DLRVQELLKL ICNVQTMEEM MIEMKYDTKR 

       250        260        270        280        290        300 
APLGKLTVAQ IKAGYQSLKK IEDCIRAGQH GRALVEACNE FYTRIPHDFG LSIPPVIRTE 

       310        320        330        340        350        360 
KELSDKVKLL EALGDIEIAL KLVKSERQGL EHPLDQHYRN LHCALRPLDH ESNEFKVISQ 

       370        380        390        400        410        420 
YLQSTHAPTH KDYTMTLLDV FEVEKEGEKE AFREDLPNRM LLWHGSRLSN WVGILSHGLR 

       430        440        450        460        470        480 
VAPPEAPITG YMFGKGIYFA DMSSKSANYC FASRLKNTGL LLLSEVALGQ CNELLEANPK 

       490        500        510        520        530        540 
AQGLLRGKHS TKGMGKMAPS PAHFITLNGS TVPLGPASDT GILNPEGYTL NYNEFIVYSP 

       550 
NQVRMRYLLK IQFNFLQLW 

O88554 in FASTA format

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