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UniProtKB/Swiss-Prot entry O75581


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LRP6_HUMAN
Primary accession number O75581
Secondary accession number Q17RZ2
Integrated into Swiss-Prot on May 10, 2004
Sequence was last modified on November 1, 1998 (Sequence version 1)
Annotations were last modified on    June 16, 2009 (Entry version 70)
Name and origin of the protein
Protein name Low-density lipoprotein receptor-related protein 6 [Precursor]
Synonyms None
Gene name
Name: LRP6
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Kidney;
DOI=10.1006/bbrc.1998.9061; PubMed=9704021 [NCBI, ExPASy, EBI, Israel, Japan]
Brown S.D., Twells R.C., Hey P.J., Cox R.D., Levy E.R., Soderman A.R., Metzker M.L., Caskey C.T., Todd J.A., Hess J.F.;
"Isolation and characterization of LRP6, a novel member of the low density lipoprotein receptor gene family.";
Biochem. Biophys. Res. Commun. 248:879-888(1998).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT VAL-1062.
TISSUE=Cerebellum;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
FUNCTION, AND DOMAINS REQUIRED FOR INTERACTION WITH DKK1 AND DKK2.
DOI=10.1038/35077108; PubMed=11357136 [NCBI, ExPASy, EBI, Israel, Japan]
Mao B., Wu W., Li Y., Hoppe D., Stannek P., Glinka A., Niehrs C.;
"LDL-receptor-related protein 6 is a receptor for Dickkopf proteins.";
Nature 411:321-325(2001).
[4]
INTERACTION WITH FZD5; DKK1 AND DKK2.
DOI=10.1074/jbc.M300191200; PubMed=12857724 [NCBI, ExPASy, EBI, Israel, Japan]
Caricasole A., Ferraro T., Iacovelli L., Barletta E., Caruso A., Melchiorri D., Terstappen G.C., Nicoletti F.;
"Functional characterization of WNT7A signaling in PC12 cells: interaction with A FZD5 x LRP6 receptor complex and modulation by Dickkopf proteins.";
J. Biol. Chem. 278:37024-37031(2003).
[5]
REVIEW.
DOI=10.1242/dev.01117; PubMed=15084453 [NCBI, ExPASy, EBI, Israel, Japan]
He X., Semenov M., Tamai K., Zeng X.;
"LDL receptor-related proteins 5 and 6 in Wnt/beta-catenin signaling: arrows point the way.";
Development 131:1663-1677(2004).
[6]
VARIANT ADCAD2 CYS-611, AND CHARACTERIZATION OF VARIANT ADCAD2 CYS-611.
DOI=10.1126/science.1136370; PubMed=17332414 [NCBI, ExPASy, EBI, Israel, Japan]
Mani A., Radhakrishnan J., Wang H., Mani A., Mani M.-A., Nelson-Williams C., Carew K.S., Mane S., Najmabadi H., Wu D., Lifton R.P.;
"LRP6 mutation in a family with early coronary disease and metabolic risk factors.";
Science 315:1278-1282(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF074264; AAC33006.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC117136; AAI17137.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC126405; AAI26406.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00000203; -.
PIR JE0272; JE0272.
RefSeq NP_002327.2; -.
UniGene Hs.584775
3D structure databases
HSSP P01130; 1AJJ. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
ModBase O75581.
Protein-protein interaction databases
IntAct O75581; 2.
PTM databases
PhosphoSite O75581; -.
Enzyme and pathway databases
Pathway_Interaction_DB wnt_canonical_pathway; Canonical Wnt signaling pathway.
ps1pathway; Presenilin action in Notch and Wnt signaling.
wnt_signaling_pathway; Wnt signaling.
Organism-specific databases
GeneCards GC12M012164; -.
H-InvDB HIX0036693; -.
HGNC HGNC:6698; LRP6.
GenAtlas LRP6.
HPA CAB004490; -.
MIM 603507; gene. [NCBI / EBI]
610947; phenotype. [NCBI / EBI]
Orphanet 94062; Coronary artery disease - hyperlipidemia - hypertension - diabetes - osteoporosis.
PharmGKB PA30456; -.
Gene expression databases
ArrayExpress O75581; -.
Bgee O75581; -.
CleanEx HS_LRP6; -.
GermOnline ENSG00000070018; Homo sapiens.
Ontologies
GO
GO:0016021; Cellular component: integral to membrane (traceable author statement from ProtInc).
GO:0005886; Cellular component: plasma membrane (inferred from direct assay from MGI).
GO:0005041; Molecular function: low-density lipoprotein receptor activity (inferred from direct assay from MGI).
GO:0006897; Biological process: endocytosis (inferred from electronic annotation from UniProtKB-KW).
GO:0007275; Biological process: multicellular organismal development (inferred from electronic annotation from UniProtKB-KW).
GO:0016055; Biological process: Wnt receptor signaling pathway (inferred from direct assay from MGI).
QuickGo view.
Family and domain databases
InterPro IPR011042; 6-blade_b-propeller_TolB-like.
IPR006209; EGF.
IPR006210; EGF-like.
IPR013032; EGF-like_reg_CS.
IPR002172; LDL_rcpt_classA_cys-rich.
IPR000033; LDLR.
IPR017049; Low_density_Lipo_rcpt-rel_p5/6.
Graphical view of domain structure.
Gene3D G3DSA:2.120.10.30; 6-blade_b-propeller_TolB-like; 4.
G3DSA:4.10.400.10; LDL_rcpt_classA_cys-rich; 3.
Pfam PF00008; EGF; 4.
PF00057; Ldl_recept_a; 3.
PF00058; Ldl_recept_b; 20.
Pfam graphical view of domain structure.
PIRSF PIRSF036314; LDL_recpt-rel_p5/6; 1.
PRINTS PR00261; LDLRECEPTOR.
SMART SM00181; EGF; 4.
SM00192; LDLa; 3.
SM00135; LY; 20.
SMART graphical view of domain structure.
PROSITE PS00022; EGF_1; FALSE_NEG.
PS01186; EGF_2; 1.
PS50026; EGF_3; FALSE_NEG.
PS01209; LDLRA_1; 3.
PS50068; LDLRA_2; 3.
PS51120; LDLRB; 19.
PROSITE graphical view of domain structure (profiles).
Proteomic databases
PRIDE O75581; -.
Genome annotation databases
Ensembl ENSG00000070018; Homo sapiens. [Contig view]
GeneID 4040; -.
KEGG hsa:4040; -.
Phylogenomic databases
HOGENOM O75581; -.
HOVERGEN O75581; -.
Other
NextBio 15822; -.
SOURCE LRP6; Homo sapiens.
ProtoNet O75581.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Developmental protein; Disease mutation; Disulfide bond; EGF-like domain; Endocytosis; Glycoprotein; Membrane; Polymorphism; Receptor; Repeat; Signal; Transmembrane; Wnt signaling pathway.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom    To Length Description FTId
SIGNAL   1     19  19     Potential. 
CHAIN   20   1613  1594     Low-density lipoprotein receptor-related protein 6. PRO_0000017330
TOPO_DOM   20   1370  1351     Extracellular (Potential). 
TRANSMEM   1371   1393  23     Potential. 
TOPO_DOM   1394   1613  220     Cytoplasmic (Potential). 
REPEAT   63    106  44     LDL-receptor class B 1. 
REPEAT   107    149  43     LDL-receptor class B 2. 
REPEAT   150    193  44     LDL-receptor class B 3. 
REPEAT   194    236  43     LDL-receptor class B 4. 
REPEAT   237    276  40     LDL-receptor class B 5. 
DOMAIN   282    324  43     EGF-like 1. 
REPEAT   372    414  43     LDL-receptor class B 6. 
REPEAT   415    457  43     LDL-receptor class B 7. 
REPEAT   458    501  44     LDL-receptor class B 8. 
REPEAT   502    542  41     LDL-receptor class B 9. 
REPEAT   543    584  42     LDL-receptor class B 10. 
DOMAIN   588    628  41     EGF-like 2. 
REPEAT   674    716  43     LDL-receptor class B 11. 
REPEAT   717    759  43     LDL-receptor class B 12. 
REPEAT   760    802  43     LDL-receptor class B 13. 
REPEAT   803    842  40     LDL-receptor class B 14. 
REPEAT   843    885  43     LDL-receptor class B 15. 
DOMAIN   889    930  42     EGF-like 3. 
REPEAT   977   1025  49     LDL-receptor class B 16. 
REPEAT   1026   1068  43     LDL-receptor class B 17. 
REPEAT   1069   1113  45     LDL-receptor class B 18. 
REPEAT   1114   1156  43     LDL-receptor class B 19. 
REPEAT   1157   1198  42     LDL-receptor class B 20. 
DOMAIN   1203   1244  42     EGF-like 4. 
DOMAIN   1248   1286  39     LDL-receptor class A 1. 
DOMAIN   1287   1323  37     LDL-receptor class A 2. 
DOMAIN   1325   1361  37     LDL-receptor class A 3. 
MOTIF   1487   1491  5     PPPSP motif. 
MOTIF   1604   1608  5     PPPSP motif. 
CARBOHYD   42     42        N-linked (GlcNAc...) (Potential). 
CARBOHYD   81     81        N-linked (GlcNAc...) (Potential). 
CARBOHYD   281    281        N-linked (GlcNAc...) (Potential). 
CARBOHYD   433    433        N-linked (GlcNAc...) (Potential). 
CARBOHYD   486    486        N-linked (GlcNAc...) (Potential). 
CARBOHYD   692    692        N-linked (GlcNAc...) (Potential). 
CARBOHYD   859    859        N-linked (GlcNAc...) (Potential). 
CARBOHYD   865    865        N-linked (GlcNAc...) (Potential). 
CARBOHYD   926    926        N-linked (GlcNAc...) (Potential). 
CARBOHYD   1039   1039        N-linked (GlcNAc...) (Potential). 
DISULFID   286    297        By similarity. 
DISULFID   293    308        By similarity. 
DISULFID   310    323        By similarity. 
DISULFID   592    603        By similarity. 
DISULFID   599    612        By similarity. 
DISULFID   614    627        By similarity. 
DISULFID   893    904        By similarity. 
DISULFID   900    914        By similarity. 
DISULFID   916    929        By similarity. 
DISULFID   1207   1218        By similarity. 
DISULFID   1214   1228        By similarity. 
DISULFID   1230   1243        By similarity. 
DISULFID   1249   1263        By similarity. 
DISULFID   1256   1276        By similarity. 
DISULFID   1270   1285        By similarity. 
DISULFID   1288   1300        By similarity. 
DISULFID   1295   1313        By similarity. 
DISULFID   1307   1322        By similarity. 
DISULFID   1326   1338        By similarity. 
DISULFID   1333   1351        By similarity. 
DISULFID   1345   1360        By similarity. 
VARIANT   483    483  1     V -> I (in dbSNP:rs7975614 [NCBI]). VAR_030349 
VARIANT   611    611  1     R -> C (in ADCAD2; impairs Wnt signaling in vitro). VAR_034701 
VARIANT   817    817  1     S -> C (in dbSNP:rs2302686 [NCBI]). VAR_030350 
VARIANT   1062   1062  1     I -> V (in dbSNP:rs2302685 [NCBI]). VAR_024520 
VARIANT   1401   1401  1     R -> H (in dbSNP:rs34815107 [NCBI]). VAR_034702 
Sequence information
Length: 1613 AA [This is the length of the unprocessed precursor] Molecular weight: 180443 Da [This is the MW of the unprocessed precursor] CRC64: 4BC1141E395D8B5B [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGAVLRSLLA CSFCVLLRAA PLLLYANRRD LRLVDATNGK ENATIVVGGL EDAAAVDFVF 

        70         80         90        100        110        120 
SHGLIYWSDV SEEAIKRTEF NKTESVQNVV VSGLLSPDGL ACDWLGEKLY WTDSETNRIE 

       130        140        150        160        170        180 
VSNLDGSLRK VLFWQELDQP RAIALDPSSG FMYWTDWGEV PKIERAGMDG SSRFIIINSE 

       190        200        210        220        230        240 
IYWPNGLTLD YEEQKLYWAD AKLNFIHKSN LDGTNRQAVV KGSLPHPFAL TLFEDILYWT 

       250        260        270        280        290        300 
DWSTHSILAC NKYTGEGLRE IHSDIFSPMD IHAFSQQRQP NATNPCGIDN GGCSHLCLMS 

       310        320        330        340        350        360 
PVKPFYQCAC PTGVKLLENG KTCKDGATEL LLLARRTDLR RISLDTPDFT DIVLQLEDIR 

       370        380        390        400        410        420 
HAIAIDYDPV EGYIYWTDDE VRAIRRSFID GSGSQFVVTA QIAHPDGIAV DWVARNLYWT 

       430        440        450        460        470        480 
DTGTDRIEVT RLNGTMRKIL ISEDLEEPRA IVLDPMVGYM YWTDWGEIPK IERAALDGSD 

       490        500        510        520        530        540 
RVVLVNTSLG WPNGLALDYD EGKIYWGDAK TDKIEVMNTD GTGRRVLVED KIPHIFGFTL 

       550        560        570        580        590        600 
LGDYVYWTDW QRRSIERVHK RSAEREVIID QLPDLMGLKA TNVHRVIGSN PCAEENGGCS 

       610        620        630        640        650        660 
HLCLYRPQGL RCACPIGFEL ISDMKTCIVP EAFLLFSRRA DIRRISLETN NNNVAIPLTG 

       670        680        690        700        710        720 
VKEASALDFD VTDNRIYWTD ISLKTISRAF MNGSALEHVV EFGLDYPEGM AVDWLGKNLY 

       730        740        750        760        770        780 
WADTGTNRIE VSKLDGQHRQ VLVWKDLDSP RALALDPAEG FMYWTEWGGK PKIDRAAMDG 

       790        800        810        820        830        840 
SERTTLVPNV GRANGLTIDY AKRRLYWTDL DTNLIESSNM LGLNREVIAD DLPHPFGLTQ 

       850        860        870        880        890        900 
YQDYIYWTDW SRRSIERANK TSGQNRTIIQ GHLDYVMDIL VFHSSRQSGW NECASSNGHC 

       910        920        930        940        950        960 
SHLCLAVPVG GFVCGCPAHY SLNADNRTCS APTTFLLFSQ KSAINRMVID EQQSPDIILP 

       970        980        990       1000       1010       1020 
IHSLRNVRAI DYDPLDKQLY WIDSRQNMIR KAQEDGSQGF TVVVSSVPSQ NLEIQPYDLS 

      1030       1040       1050       1060       1070       1080 
IDIYSRYIYW TCEATNVINV TRLDGRSVGV VLKGEQDRPR AIVVNPEKGY MYFTNLQERS 

      1090       1100       1110       1120       1130       1140 
PKIERAALDG TEREVLFFSG LSKPIALALD SRLGKLFWAD SDLRRIESSD LSGANRIVLE 

      1150       1160       1170       1180       1190       1200 
DSNILQPVGL TVFENWLYWI DKQQQMIEKI DMTGREGRTK VQARIAQLSD IHAVKELNLQ 

      1210       1220       1230       1240       1250       1260 
EYRQHPCAQD NGGCSHICLV KGDGTTRCSC PMHLVLLQDE LSCGEPPTCS PQQFTCFTGE 

      1270       1280       1290       1300       1310       1320 
IDCIPVAWRC DGFTECEDHS DELNCPVCSE SQFQCASGQC IDGALRCNGD ANCQDKSDEK 

      1330       1340       1350       1360       1370       1380 
NCEVLCLIDQ FRCANGQCIG KHKKCDHNVD CSDKSDELDC YPTEEPAPQA TNTVGSVIGV 

      1390       1400       1410       1420       1430       1440 
IVTIFVSGTV YFICQRMLCP RMKGDGETMT NDYVVHGPAS VPLGYVPHPS SLSGSLPGMS 

      1450       1460       1470       1480       1490       1500 
RGKSMISSLS IMGGSSGPPY DRAHVTGASS SSSSSTKGTY FPAILNPPPS PATERSHYTM 

      1510       1520       1530       1540       1550       1560 
EFGYSSNSPS THRSYSYRPY SYRHFAPPTT PCSTDVCDSD YAPSRRMTSV ATAKGYTSDL 

      1570       1580       1590       1600       1610 
NYDSEPVPPP PTPRSQYLSA EENYESCPPS PYTERSYSHH LYPPPPSPCT DSS 

O75581 in FASTA format

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