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UniProtKB/Swiss-Prot entry O70441


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name SYN3_RAT
Primary accession number O70441
Secondary accession numbers None
Integrated into Swiss-Prot on May 30, 2000
Sequence was last modified on August 1, 1998 (Sequence version 1)
Annotations were last modified on    June 16, 2009 (Entry version 65)
Name and origin of the protein
Protein name Synapsin-3
Synonym Synapsin III
Gene name
Name: Syn3
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Brain;
DOI=10.1074/jbc.273.22.13371; PubMed=9593663 [NCBI, ExPASy, EBI, Israel, Japan]
Hosaka M., Suedhof T.C.;
"Synapsin III, a novel synapsin with an unusual regulation by Ca2+.";
J. Biol. Chem. 273:13371-13374(1998).
[2]
INTERACTION WITH CAPON.
DOI=10.1073/pnas.261705799; PubMed=11867766 [NCBI, ExPASy, EBI, Israel, Japan]
Jaffrey S.R., Benfenati F., Snowman A.M., Czernik A.J., Snyder S.H.;
"Neuronal nitric-oxide synthase localization mediated by a ternary complex with synapsin and CAPON.";
Proc. Natl. Acad. Sci. U.S.A. 99:3199-3204(2002).
Comments
  • FUNCTION: May be involved in the regulation of neurotransmitter release and synaptogenesis. Binds ATP with high affinity and ADP with a lower affinity. This is consistent with a catalytic role of the C-domain in which ADP would be dissociated by cellular ATP after bound ATP was hydrolyzed.
  • SUBUNIT: Interacts with CAPON.
  • SUBCELLULAR LOCATION: Cytoplasmic vesicle, secretory vesicle, synaptic vesicle membrane; Peripheral membrane protein; Cytoplasmic side. Note=Peripheral membrane protein localized to the cytoplasmic surface of synaptic vesicles.
  • TISSUE SPECIFICITY: Expressed primarily in brain.
  • MISCELLANEOUS: Regulated by calcium.
  • SIMILARITY: Belongs to the synapsin family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF056704; AAC24521.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00390215; -.
RefSeq NP_058805.1; -.
UniGene Rn.162920
3D structure databases
HSSP P17599; 1AUX. [HSSP ENTRY / PDB]
SMR O70441; 90-395.
ModBase O70441.
Protein-protein interaction databases
DIP DIP:358N; -.
PTM databases
PhosphoSite O70441; -.
Organism-specific databases
RGD 3799; Syn3.
Ontologies
GO
GO:0030054; Cellular component: cell junction (inferred from electronic annotation from UniProtKB-KW).
GO:0030141; Cellular component: secretory granule (inferred from electronic annotation from UniProtKB-SubCell).
GO:0030672; Cellular component: synaptic vesicle membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0005524; Molecular function: ATP binding (inferred from direct assay from RGD).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0003824; Molecular function: catalytic activity (inferred from electronic annotation from InterPro).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from UniProtKB).
GO:0007269; Biological process: neurotransmitter secretion (traceable author statement from RGD).
QuickGo view.
Family and domain databases
InterPro IPR013816; ATP_grasp_subdomain_2.
IPR001359; Synapsin.
IPR019735; Synapsin_CS.
IPR019569; Synapsin_N.
IPR019736; Synapsin_phosporylation.
Graphical view of domain structure.
Gene3D G3DSA:3.30.470.20; ATP_grasp_subdomain_2; 1.
Pfam PF02078; Synapsin; 1.
PF02750; Synapsin_C; 1.
PF10581; Synapsin_N; 1.
Pfam graphical view of domain structure.
PRINTS PR01368; SYNAPSIN.
PROSITE PS00415; SYNAPSIN_1; 1.
PS00416; SYNAPSIN_2; 1.
Genome annotation databases
Ensembl ENSRNOG00000026866; Rattus norvegicus. [Contig view]
GeneID 29130; -.
KEGG rno:29130; -.
Phylogenomic databases
HOVERGEN O70441; -.
OMA O70441; MQVVRNG.
Other
NextBio 608075; -.
ProtoNet O70441.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Calcium; Cell junction; Cytoplasmic vesicle; Membrane; Nucleotide-binding; Phosphoprotein; Synapse.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   579  579     Synapsin-3. PRO_0000183026
REGION   1    28  28     A. 
REGION   28    90  63     B; linker. 
REGION   91   398  308     C; actin-binding and synaptic-vesicle binding. 
REGION   399   530  132     J; Pro-rich linker. 
REGION   531   579  49     E. 
MOD_RES   461   461        Phosphoserine (By similarity). 
MOD_RES   469   469        Phosphoserine (By similarity). 
MOD_RES   483   483        Phosphoserine (By similarity). 
Sequence information
Length: 579 AA [This is the length of the unprocessed precursor] Molecular weight: 63349 Da [This is the MW of the unprocessed precursor] CRC64: EA69F25ED14A4722 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNFLRRRLSD SSFVANLPNG YMPDLQRPES SSSSPASPAT ERRHPQPLAA SFSSPGSSLF 

        70         80         90        100        110        120 
SSFSSAMKQT PQAPTGLMEP PTPVTPVVQR PRILLVIDDA HTDWSKYFHG KKVNGDIEIR 

       130        140        150        160        170        180 
VEQAEFSELN LAAYVTGGCM VDMQVVRNGT KIVRSFKPDF ILVRQHAYSM ALAEDYRSLV 

       190        200        210        220        230        240 
IGLQYGGLPA VNSLYSVYNF CSKPWVFSQL IKIFHSLGPE KFPLVEQTFF PNHKPMLTAP 

       250        260        270        280        290        300 
NFPVVIKLGH AHAGMGKIKV ENQHDYQDIT SVVAMAKTYA TTEAFIDSKY DIRIQKIGSN 

       310        320        330        340        350        360 
YKAYMRTSIS GNWKANTGSA MLEQVAMTER YRLWVDSCSE MFGGLDICAV KAVHSKNGRD 

       370        380        390        400        410        420 
YIIEVMDSSM PLIGEHVEED KQLMADLVVS KMSQLLVPGA SVPSPLRPWG PQTKSAKSPG 

       430        440        450        460        470        480 
QGQLGPLLGQ PQPRPPPQGG PRQAQSPQPP RSRSPSQQRL SPQGQQPVSP QSGSPQQQRS 

       490        500        510        520        530        540 
PGSPQLSRAS GGSSPNQASK PTASLSSHTR PPVQGRSTSQ QGEEPQKTAS PHPHLNKSQS 

       550        560        570 
LTNSLSTSDT SHRGTPSEDE AKAETIRNLR KSFASLFSD 

O70441 in FASTA format

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