ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry O60260


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name PRKN2_HUMAN
Primary accession number O60260
Secondary accession numbers Q5TFV8 Q6Q2I6 Q8NI41 Q8NI43 Q8NI44 Q8WW07
Integrated into Swiss-Prot on October 11, 2004
Sequence was last modified on October 17, 2006 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 79)
Name and origin of the protein
Protein name E3 ubiquitin-protein ligase parkin
Synonyms EC 6.3.2.-
Parkinson juvenile disease protein 2
Parkinson disease protein 2
Gene name
Name: PARK2
Synonyms: PRKN
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), AND INVOLVEMENT IN JUVENILE PARKINSON DISEASE.
TISSUE=Fetal brain, and Skeletal muscle;
DOI=10.1038/33416; PubMed=9560156 [NCBI, ExPASy, EBI, Israel, Japan]
Kitada T., Asakawa S., Hattori N., Matsumine H., Yamamura Y., Minoshima S., Yokochi M., Mizuno Y., Shimizu N.;
"Mutations in the parkin gene cause autosomal recessive juvenile parkinsonism.";
Nature 392:605-608(1998).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 3 AND 4).
D'Agata V., Scapagnini G., Cavallaro S.;
"Functional and molecular diversity of parkin.";
Submitted (MAY-2001) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1038/nature02055; PubMed=14574404 [NCBI, ExPASy, EBI, Israel, Japan]
Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D., Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., Beasley O., Bird C.P., Blakey S.E., Bray-Allen S., Brook J., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., Griffiths M.N.D., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., Oliver K., Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., Phillimore B.J.C.T., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., Ranby S.A., Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., Skuce C.D., Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., Sycamore N., Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., Thorpe A., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., White S.S., Whitehead S.L., Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., Wray P.W., Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S.;
"The DNA sequence and analysis of human chromosome 6.";
Nature 425:805-811(2003).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 5).
TISSUE=Testis;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 312-361.
Zou H.Q., Chan P.;
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases.
[6]
SUBCELLULAR LOCATION.
DOI=10.1002/1531-8249(199905)45:5<668::AID-ANA19>3.0.CO;2-Z; PubMed=10319893 [NCBI, ExPASy, EBI, Israel, Japan]
Shimura H., Hattori N., Kubo S., Yoshikawa M., Kitada T., Matsumine H., Asakawa S., Minoshima S., Yamamura Y., Shimizu N., Mizuno Y.;
"Immunohistochemical and subcellular localization of Parkin protein: absence of protein in autosomal recessive juvenile parkinsonism patients.";
Ann. Neurol. 45:668-672(1999).
[7]
FUNCTION IN UBIQUITINATION.
DOI=10.1074/jbc.C000447200; PubMed=10973942 [NCBI, ExPASy, EBI, Israel, Japan]
Imai Y., Soda M., Takahashi R.;
"Parkin suppresses unfolded protein stress-induced cell death through its E3 ubiquitin-protein ligase activity.";
J. Biol. Chem. 275:35661-35664(2000).
[8]
FUNCTION, AND CHARACTERIZATION OF VARIANTS PD PRO-42 AND ARG-240.
DOI=10.1038/77060; PubMed=10888878 [NCBI, ExPASy, EBI, Israel, Japan]
Shimura H., Hattori N., Kubo S., Mizuno Y., Asakawa S., Minoshima S., Shimizu N., Iwai K., Chiba T., Tanaka K., Suzuki T.;
"Familial Parkinson disease gene product, parkin, is a ubiquitin-protein ligase.";
Nat. Genet. 25:302-305(2000).
[9]
INTERACTION WITH UBE2L6 AND SEPT5, AND UBIQUITINATION OF SEPT5.
DOI=10.1073/pnas.240347797; PubMed=11078524 [NCBI, ExPASy, EBI, Israel, Japan]
Zhang Y., Gao J., Chung K.K.K., Huang H., Dawson V.L., Dawson T.M.;
"Parkin functions as an E2-dependent ubiquitin-protein ligase and promotes the degradation of the synaptic vesicle-associated protein, CDCrel-1.";
Proc. Natl. Acad. Sci. U.S.A. 97:13354-13359(2000).
[10]
UBIQUITINATION OF GPR37.
DOI=10.1016/S0092-8674(01)00407-X; PubMed=11439185 [NCBI, ExPASy, EBI, Israel, Japan]
Imai Y., Soda M., Inoue H., Hattori N., Mizuno Y., Takahashi R.;
"An unfolded putative transmembrane polypeptide, which can lead to endoplasmic reticulum stress, is a substrate of Parkin.";
Cell 105:891-902(2001).
[11]
INTERACTION, UBIQUITINATION OF SNCAIP, CHARACTERIZATION OF VARIANTS PARK2 ARG-240; CYS-256; TRP-275 AND ASN-415, AND MUTAGENESIS OF CYS-337; CYS-421 AND CYS-431.
DOI=10.1038/nm1001-1144; PubMed=11590439 [NCBI, ExPASy, EBI, Israel, Japan]
Chung K.K.K., Zhang Y., Lim K.L., Tanaka Y., Huang H., Gao J., Ross C.A., Dawson V.L., Dawson T.M.;
"Parkin ubiquitinates the alpha-synuclein-interacting protein, synphilin-1: implications for Lewy-body formation in Parkinson disease.";
Nat. Med. 7:1144-1150(2001).
[12]
UBIQUITINATION OF AN O-GLYCOSYLATED ISOFORM OF SNCAIP, SUBCELLULAR LOCATION, AND CHARACTERIZATION OF VARIANTS PD PRO-42 AND ARG-240.
DOI=10.1126/science.1060627; PubMed=11431533 [NCBI, ExPASy, EBI, Israel, Japan]
Shimura H., Schlossmacher M.G., Hattori N., Frosch M.P., Trockenbacher A., Schneider R., Mizuno Y., Kosik K.S., Selkoe D.J.;
"Ubiquitination of a new form of alpha-synuclein by parkin from human brain: implications for Parkinson's disease.";
Science 293:263-269(2001).
[13]
PRESENCE OF ATYPICAL RING FINGER DOMAINS.
PubMed=12446796 [NCBI, ExPASy, EBI, Israel, Japan]
Marin I., Ferrus A.;
"Comparative genomics of the RBR family, including the Parkinson's disease-related gene parkin and the genes of the ariadne subfamily.";
Mol. Biol. Evol. 19:2039-2050(2002).
[14]
INTERACTION WITH STUB1 AND HSP70, AND UBIQUITINATION OF STUB1.
DOI=10.1016/S1097-2765(02)00583-X; PubMed=12150907 [NCBI, ExPASy, EBI, Israel, Japan]
Imai Y., Soda M., Hatakeyama S., Akagi T., Hashikawa T., Nakayama K., Takahashi R.;
"CHIP is associated with Parkin, a gene responsible for familial Parkinson's disease, and enhances its ubiquitin ligase activity.";
Mol. Cell 10:55-67(2002).
[15]
INTERACTION WITH SYT11, CHARACTERIZATION OF VARIANT PD GLY-289, AND MUTAGENESIS OF CYS-418.
DOI=10.1093/hmg/ddg269; PubMed=12925569 [NCBI, ExPASy, EBI, Israel, Japan]
Huynh D.P., Scoles D.R., Nguyen D., Pulst S.M.;
"The autosomal recessive juvenile Parkinson disease gene product, parkin, interacts with and ubiquitinates synaptotagmin XI.";
Hum. Mol. Genet. 12:2587-2597(2003).
[16]
INTERACTION WITH PACRG.
DOI=10.1074/jbc.M309655200; PubMed=14532270 [NCBI, ExPASy, EBI, Israel, Japan]
Imai Y., Soda M., Murakami T., Shoji M., Abe K., Takahashi R.;
"A product of the human gene adjacent to parkin is a component of Lewy bodies and suppresses Pael receptor-induced cell death.";
J. Biol. Chem. 278:51901-51910(2003).
[17]
FUNCTION, INTERACTION WITH FBXW7 AND CUL1, AND UBIQUITINATION OF CYCLIN E.
DOI=10.1016/S0896-6273(03)00084-9; PubMed=12628165 [NCBI, ExPASy, EBI, Israel, Japan]
Staropoli J.F., McDermott C., Martinat C., Schulman B., Demireva E., Abeliovich A.;
"Parkin is a component of an SCF-like ubiquitin ligase complex and protects postmitotic neurons from kainate excitotoxicity.";
Neuron 37:735-749(2003).
[18]
INVOLVEMENT IN CANCER.
DOI=10.1038/sj.onc.1207072; PubMed=14614460 [NCBI, ExPASy, EBI, Israel, Japan]
Denison S.R., Wang F., Becker N.A., Schuele B., Kock N., Phillips L.A., Klein C., Smith D.I.;
"Alterations in the common fragile site gene Parkin in ovarian and other cancers.";
Oncogene 22:8370-8378(2003).
[19]
FUNCTION, AND INVOLVEMENT IN CANCER.
DOI=10.1073/pnas.0931262100; PubMed=12719539 [NCBI, ExPASy, EBI, Israel, Japan]
Cesari R., Martin E.S., Calin G.A., Pentimalli F., Bichi R., McAdams H., Trapasso F., Drusco A., Shimizu M., Masciullo V., D'Andrilli G., Scambia G., Picchio M.C., Alder H., Godwin A.K., Croce C.M.;
"Parkin, a gene implicated in autosomal recessive juvenile parkinsonism, is a candidate tumor suppressor gene on chromosome 6q25-q27.";
Proc. Natl. Acad. Sci. U.S.A. 100:5956-5961(2003).
[20]
REVIEW.
DOI=10.1038/sj.embor.7400188; PubMed=15229644 [NCBI, ExPASy, EBI, Israel, Japan]
Kahle P.J., Haass C.;
"How does parkin ligate ubiquitin to Parkinson's disease?";
EMBO Rep. 5:681-685(2004).
[21]
FUNCTION, UBIQUITINATION, AND S-NITROSYLATION.
DOI=10.1126/science.1093891; PubMed=15105460 [NCBI, ExPASy, EBI, Israel, Japan]
Chung K.K.K., Thomas B., Li X., Pletnikova O., Troncoso J.C., Marsh L., Dawson V.L., Dawson T.M.;
"S-nitrosylation of parkin regulates ubiquitination and compromises parkin's protective function.";
Science 304:1328-1331(2004).
[22]
INTERACTION WITH LRRK2.
DOI=10.1073/pnas.0508052102; PubMed=16352719 [NCBI, ExPASy, EBI, Israel, Japan]
Smith W.W., Pei Z., Jiang H., Moore D.J., Liang Y., West A.B., Dawson V.L., Dawson T.M., Ross C.A.;
"Leucine-rich repeat kinase 2 (LRRK2) interacts with parkin and mutant LRRK2 induces neuronal degeneration.";
Proc. Natl. Acad. Sci. U.S.A. 102:18676-18681(2005).
[23]
INTERACTION WITH RANBP2.
DOI=10.1074/jbc.M504994200; PubMed=16332688 [NCBI, ExPASy, EBI, Israel, Japan]
Um J.W., Min D.S., Rhim H., Kim J., Paik S.R., Chung K.C.;
"Parkin ubiquitinates and promotes the degradation of RanBP2.";
J. Biol. Chem. 281:3595-3603(2006).
[24]
INTERACTION WITH SUMO1, AND SUBCELLULAR LOCATION.
DOI=10.1002/jnr.21041; PubMed=16955485 [NCBI, ExPASy, EBI, Israel, Japan]
Um J.W., Chung K.C.;
"Functional modulation of parkin through physical interaction with SUMO-1.";
J. Neurosci. Res. 84:1543-1554(2006).
[25]
STRUCTURE BY NMR OF 1-76, AND INTERACTION WITH PSMD4.
DOI=10.1038/sj.embor.embor764; PubMed=12634850 [NCBI, ExPASy, EBI, Israel, Japan]
Sakata E., Yamaguchi Y., Kurimoto E., Kikuchi J., Yokoyama S., Yamada S., Kawahara H., Yokosawa H., Hattori N., Mizuno Y., Tanaka K., Kato K.;
"Parkin binds the Rpn10 subunit of 26S proteasomes through its ubiquitin-like domain.";
EMBO Rep. 4:301-306(2003).
[26]
STRUCTURE BY NMR OF 307-384 IN COMPLEX WITH ZINC IONS, CHARACTERIZATION OF VARIANT PARK2 PRO-351, MUTAGENESIS OF CYS-332 AND CYS-365, AND MASS SPECTROMETRY.
DOI=10.1073/pnas.0610548104; PubMed=17360614 [NCBI, ExPASy, EBI, Israel, Japan]
Beasley S.A., Hristova V.A., Shaw G.S.;
"Structure of the Parkin in-between-ring domain provides insights for E3-ligase dysfunction in autosomal recessive Parkinson's disease.";
Proc. Natl. Acad. Sci. U.S.A. 104:3095-3100(2007).
[27]
REVIEW ON VARIANTS.
DOI=10.1093/hmg/ddh089; PubMed=14976155 [NCBI, ExPASy, EBI, Israel, Japan]
Mata I.F., Lockhart P.J., Farrer M.J.;
"Parkin genetics: one model for Parkinson's disease.";
Hum. Mol. Genet. 13:R127-R133(2004).
[28]
VARIANT PARK2 ARG-240.
DOI=10.1006/bbrc.1998.9134; PubMed=9731209 [NCBI, ExPASy, EBI, Israel, Japan]
Hattori N., Matsumine H., Asakawa S., Kitada T., Yoshino H., Elibol B., Brookes A.J., Yamamura Y., Kobayashi T., Wang M., Yoritaka A., Minoshima S., Shimizu N., Mizuno Y.;
"Point mutations (Thr240Arg and Gln311Stop) in the Parkin gene.";
Biochem. Biophys. Res. Commun. 249:754-758(1998).
[29]
ERRATUM.
Hattori N., Matsumine H., Asakawa S., Kitada T., Yoshino H., Elibol B., Brookes A.J., Yamamura Y., Kobayashi T., Wang M., Yoritaka A., Minoshima S., Shimizu N., Mizuno Y.;
Biochem. Biophys. Res. Commun. 251:666-666(1998).
[30]
VARIANTS PARK2 ASN-161; CYS-256; TRP-275 AND ASN-415, AND VARIANTS ASN-167; LEU-380 AND ASN-394.
DOI=10.1093/hmg/8.4.567; PubMed=10072423 [NCBI, ExPASy, EBI, Israel, Japan]
Abbas N., Luecking C.B., Ricard S., Duerr A., Bonifati V., De Michele G., Bouley S., Vaughan J.R., Gasser T., Marconi R., Broussolle E., Brefel-Courbon C., Harhangi B.S., Oostra B.A., Fabrizio E., Bohme G.A., Pradier L., Wood N.W., Filla A., Meco G., Denefle P., Agid Y., Brice A.;
"A wide variety of mutations in the parkin gene are responsible for autosomal recessive parkinsonism in Europe.";
Hum. Mol. Genet. 8:567-574(1999).
[31]
VARIANT ASN-167.
PubMed=10511432 [NCBI, ExPASy, EBI, Israel, Japan]
Satoh J., Kuroda Y.;
"Association of codon 167 Ser/Asn heterozygosity in the parkin gene with sporadic Parkinson's disease.";
NeuroReport 10:2735-2739(1999).
[32]
VARIANT PARK2 PHE-431.
DOI=10.1002/1531-8249(200008)48:2<245::AID-ANA15>3.3.CO;2-U; PubMed=10939576 [NCBI, ExPASy, EBI, Israel, Japan]
Maruyama M., Ikeuchi T., Saito M., Ishikawa A., Yuasa T., Tanaka H., Hayashi S., Wakabayashi K., Takahashi H., Tsuji S.;
"Novel mutations, pseudo-dominant inheritance, and possible familial affects in patients with autosomal recessive juvenile parkinsonism.";
Ann. Neurol. 48:245-250(2000).
[33]
VARIANTS ASN-167; TRP-366 AND LEU-380.
DOI=10.1159/000008203; PubMed=10965160 [NCBI, ExPASy, EBI, Israel, Japan]
Hu C.-J., Sung S.-M., Liu H.-C., Lee C.-C., Tsai C.-H., Chang J.-G.;
"Polymorphisms of the parkin gene in sporadic Parkinson's disease among Chinese in Taiwan.";
Eur. Neurol. 44:90-93(2000).
[34]
VARIANTS PD ASN-161; ASN-211; CYS-256; TRP-275; ASN-280; GLY-289; GLU-328; CYS-334; ASN-415 AND ASP-430.
DOI=10.1056/NEJM200005253422103; PubMed=10824074 [NCBI, ExPASy, EBI, Israel, Japan]
Luecking C.B., Duerr A., Bonifati V., Vaughan J.R., De Michele G., Gasser T., Harhangi B.S., Meco G., Denefle P., Wood N.W., Agid Y., Brice A.;
"Association between early-onset Parkinson's disease and mutations in the parkin gene.";
N. Engl. J. Med. 342:1560-1567(2000).
[35]
VARIANTS PD ARG-211; TRP-275 AND ASP-430.
DOI=10.1086/318791; PubMed=11179010 [NCBI, ExPASy, EBI, Israel, Japan]
Periquet M., Luecking C.B., Vaughan J.R., Bonifati V., Duerr A., De Michele G., Horstink M., Farrer M., Illarioshkin S.N., Pollak P., Borg M., Brefel-Courbon C., Denefle P., Meco G., Gasser T., Breteler M.M., Wood N.W., Agid Y., Brice A.;
"Origin of the mutations in the parkin gene in Europe: exon rearrangements are independent recurrent events, whereas point mutations may result from founder effects.";
Am. J. Hum. Genet. 68:617-626(2001).
[36]
VARIANT PARK2 GLU-82.
DOI=10.1093/hmg/10.16.1649; PubMed=11487568 [NCBI, ExPASy, EBI, Israel, Japan]
Hedrich K., Kann M., Lanthaler A.J., Dalski A., Eskelson C., Landt O., Schwinger E., Vieregge P., Lang A.E., Breakefield X.O., Ozelius L.J., Pramstaller P.P., Klein C.;
"The importance of gene dosage studies: mutational analysis of the parkin gene in early-onset parkinsonism.";
Hum. Mol. Genet. 10:1649-1656(2001).
[37]
VARIANT PARK2 TYR-212.
DOI=10.1016/S0304-3940(00)01733-X; PubMed=11163284 [NCBI, ExPASy, EBI, Israel, Japan]
Pineda-Trujillo N., Carvajal-Carmona L.G., Buritica O., Moreno S., Uribe C., Pineda D., Toro M., Garcia F., Arias W., Bedoya G., Lopera F., Ruiz-Linares A.;
"A novel Cys212Tyr founder mutation in parkin and allelic heterogeneity of juvenile parkinsonism in a population from North West Colombia.";
Neurosci. Lett. 298:87-90(2001).
[38]
VARIANTS PD GLU-82; CYS-256; TRP-275; GLU-328 AND 441-ARG.
DOI=10.1002/ajmg.10525; PubMed=12116199 [NCBI, ExPASy, EBI, Israel, Japan]
French Parkinson's disease genetics study group; European consortium on genetic susceptibility on Parkinson's disease;
West A., Periquet M., Lincoln S., Luecking C.B., Nicholl D., Bonifati V., Rawal N., Gasser T., Lohmann E., Deleuze J.-F., Maraganore D., Levey A., Wood N.W., Duerr A., Hardy J., Brice A., Farrer M.;
"Complex relationship between parkin mutations and Parkinson disease.";
Am. J. Med. Genet. 114:584-591(2002).
[39]
ERRATUM.
French Parkinson's disease genetics study group; European consortium on genetic susceptibility on Parkinson's disease;
West A., Periquet M., Lincoln S., Luecking C.B., Nicholl D., Bonifati V., Rawal N., Gasser T., Lohmann E., Deleuze J.-F., Maraganore D., Levey A., Wood N.W., Duerr A., Hardy J., Brice A., Farrer M.J.;
Am. J. Med. Genet. 114:992-992(2002).
[40]
VARIANTS PARK2 LEU-37 AND PRO-351.
DOI=10.1002/ana.10179; PubMed=12112109 [NCBI, ExPASy, EBI, Israel, Japan]
Kann M., Jacobs H., Mohrmann K., Schumacher K., Hedrich K., Garrels J., Wiegers K., Schwinger E., Pramstaller P.P., Breakefield X.O., Ozelius L.J., Vieregge P., Klein C.;
"Role of parkin mutations in 111 community-based patients with early-onset parkinsonism.";
Ann. Neurol. 51:621-625(2002).
[41]
VARIANTS PD ASN-211; TRP-275; ASP-430 AND LEU-437.
DOI=10.1136/jmg.39.7.489; PubMed=12114481 [NCBI, ExPASy, EBI, Israel, Japan]
Nichols W.C., Pankratz N., Uniacke S.K., Pauciulo M.W., Halter C., Rudolph A., Conneally P.M., Foroud T.;
"Linkage stratification and mutation analysis at the parkin locus identifies mutation positive Parkinson's disease families.";
J. Med. Genet. 39:489-492(2002).
[42]
VARIANT PD MET-15, AND VARIANTS LEU-380 AND ASN-394.
DOI=10.1136/jnnp.73.5.582; PubMed=12397156 [NCBI, ExPASy, EBI, Israel, Japan]
Munoz E., Tolosa E., Pastor P., Marti M.J., Valldeoriola F., Campdelacreu J., Oliva R.;
"Relative high frequency of the c.255delA parkin gene mutation in Spanish patients with autosomal recessive parkinsonism.";
J. Neurol. Neurosurg. Psych. 73:582-584(2002).
[43]
VARIANTS PD PRO-42; VAL-192; CYS-256; TRP-275; ASP-430 AND LEU-437.
PubMed=11971093 [NCBI, ExPASy, EBI, Israel, Japan]
Hedrich K., Marder K., Harris J., Kann M., Lynch T., Meija-Santana H., Pramstaller P.P., Schwinger E., Bressman S.B., Fahn S., Klein C.;
"Evaluation of 50 probands with early-onset Parkinson's disease for parkin mutations.";
Neurology 58:1239-1246(2002).
[44]
VARIANT PD PRO-46.
PubMed=12362318 [NCBI, ExPASy, EBI, Israel, Japan]
Xu Y., Liu Z., Wang Y., Tao E., Chen G., Chen B.;
"A new point mutation on exon 2 of parkin gene in Parkinson's disease.";
Zhonghua Yi Xue Yi Chuan Xue Za Zhi 19:409-411(2002).
[45]
VARIANTS PD GLN-33; TYR-253; CYS-256; TRP-275; ASN-280; ASP-430 AND LEU-437, AND VARIANTS GLU-82; LEU-380 AND ASN-394.
DOI=10.1002/ana.10524; PubMed=12730996 [NCBI, ExPASy, EBI, Israel, Japan]
Oliveira S.A., Scott W.K., Martin E.R., Nance M.A., Watts R.L., Hubble J.P., Koller W.C., Pahwa R., Stern M.B., Hiner B.C., Ondo W.G., Allen F.H. Jr., Scott B.L., Goetz C.G., Small G.W., Mastaglia F., Stajich J.M., Zhang F., Booze M.W., Winn M.P., Middleton L.T., Haines J.L., Pericak-Vance M.A., Vance J.M.;
"Parkin mutations and susceptibility alleles in late-onset Parkinson's disease.";
Ann. Neurol. 53:624-629(2003).
[46]
VARIANTS PD VAL-192; ASN-211; MET-240 AND LEU-437, AND VARIANT ASN-167.
PubMed=12629236 [NCBI, ExPASy, EBI, Israel, Japan]
Foroud T., Uniacke S.K., Liu L., Pankratz N., Rudolph A., Halter C., Shults C., Marder K., Conneally P.M., Nichols W.C.;
"Heterozygosity for a mutation in the parkin gene leads to later onset Parkinson disease.";
Neurology 60:796-801(2003).
[47]
VARIANTS HIS-100; SER-271 AND SER-339.
PubMed=12781599 [NCBI, ExPASy, EBI, Israel, Japan]
Chen R., Gosavi N.S., Langston J.W., Chan P.;
"Parkin mutations are rare in patients with young-onset parkinsonism in a US population.";
Parkinsonism Relat. Disord. 9:309-312(2003).
Comments
  • FUNCTION: Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins. These substrates include SYT11, CCNE1, GPR37, STUB1, a 22 kDa O-linked glycosylated isoform of SNCAIP and SEPT5. May play a more general role in the ubiquitin proteasomal pathway by participating in the removal and/or detoxification of abnormally folded or damaged protein. Loss of this ubiquitin ligase activity appears to be the mechanism underlying pathogenesis of PARK2. May protect neurons against alpha synuclein toxicity, proteasomal dysfunction, GPR37 accumulation, and kainate-induced excitotoxicity. May play a role in controlling neurotransmitter trafficking at the presynaptic terminal and in calcium-dependent exocytosis. Regulates cyclin E during neuronal apoptosis. May represent a tumor suppressor gene.
  • PATHWAY: Protein modification; protein ubiquitination.
  • SUBUNIT: Forms an E3 ubiquitin ligase complex with UBE2L3 or UBE2L6. Part of a SCF-like complex, consisting of PARK2, CUL1 and FBXW7. Interacts with SNCAIP. Binds to the C2A and C2B domains of SYT11. Interacts and regulates the turnover of SEPT5. Part of a complex, including STUB1, HSP70 and GPR37. The amount of STUB1 in the complex increases during ER stress. STUB1 promotes the dissociation of HSP70 from PARK2 and GPR37, thus facilitating PARK2-mediated GPR37 ubiquitination. HSP70 transiently associates with unfolded GPR37 and inhibits the E3 activity of PARK2, whereas, STUB1 enhances the E3 activity of PARK2 through promotion of dissociation of HSP70 from PARK2-GPR37 complexes. Interacts with PSMD4 and PACRG. Interacts with LRRK2. Interacts with RANBP2. Interacts with SUMO1 but not SUMO2, which promotes nuclear localization and autoubiquitination.
  • INTERACTION:
    P49792:RANBP2; NbExp=6; IntAct=EBI-716346, EBI-973138;
  • SUBCELLULAR LOCATION: Cytoplasm. Nucleus. Note=Co-localizes with STY11 in neutrites. Co-localizes with SNCAIP in brainstem Lewy bodies.
  • ALTERNATIVE PRODUCTS: 5 named isoforms [FASTA] produced by alternative splicing.
    Name1
    Isoform IDO60260-1
    This is the isoform sequence displayed in this entry.
    Name2
    Isoform IDO60260-2
    Features which should be applied to build the isoform sequence: VSP_011707.
    Name3
    Isoform IDO60260-3
    Features which should be applied to build the isoform sequence: VSP_011706, VSP_011709, VSP_011710.
    Name4
    Isoform IDO60260-4
    Features which should be applied to build the isoform sequence: VSP_011705.
    Name5
    Isoform IDO60260-5
    Features which should be applied to build the isoform sequence: VSP_011708, VSP_011711, VSP_011712.
  • TISSUE SPECIFICITY: Highly expressed in the brain including the substantia nigra. Expressed in heart, testis and skeletal muscle. Expression is down-regulated or absent in tumor biopsies, and absent in the brain of PARK2 patients. Overexpression protects dopamine neurons from kainate-mediated apoptosis.
  • DOMAIN: The ubiquitin-like domain binds the PSMD4 subunit of 26S proteasomes.
  • PTM: Auto-ubiquitinates in an E2-dependent manner leading to its own degradation.
  • PTM: S-nitrosylated. The inhibition of PARK2 ubiquitin E3 ligase activity by S-nitrosylation could contribute to the degenerative process in PD by impairing the ubiquitination of PARK2 substrates.
  • DISEASE: Defects in PARK2 are a cause of Parkinson disease (PD) [MIM:168600]. PD is a complex, multifactorial disorder that typically manifests after the age of 50 years, although early-onset cases (before 50 years) are known. PD generally arises as a sporadic condition but is occasionally inherited as a simple mendelian trait. Although sporadic and familial PD are very similar, inherited forms of the disease usually begin at earlier ages and are associated with atypical clinical features. PD is characterized by bradykinesia, resting tremor, muscular rigidity and postural instability, as well as by a clinically significant response to treatment with levodopa. The pathology of PD involves the loss of dopaminergic neurons in the substantia nigra and the presence of Lewy bodies (intraneuronal accumulations of aggregated proteins), in surviving neurons in various areas of the brain.
  • DISEASE: Defects in PARK2 are the cause of autosomal recessive early onset Parkinson disease 2 (PARK2) [MIM:600116]; also known as early-onset parkinsonism with diurnal fluctuation (EPDF) or autosomal recessive juvenile Parkinson disease (PDJ). PARK2 is symptomatically different in several aspects from idiopathic Parkinson disease, although classic symptoms such as bradykinesia, rigidity and tremor are present. Additional clinical features include early DOPA-induced dyskinesia, diurnal fluctuation of the symptoms, sleep benefit, dystonia and hyper-reflexia. PARK2 is usually characterized by onset before 40, with a mean age at onset of 23.2 years. Pathologically, PARK2 patients show loss of dopaminergic neurons in the substantia nigra, similar to that seen in Parkinson disease; however, Lewy bodies (intraneuronal accumulations of aggregated proteins) are absent.
  • DISEASE: Defects in PARK2 may be involved in the development and/or progression of ovarian cancer.
  • MISCELLANEOUS: The parkin locus (PRKN), adjacent to the 6q telomere is hyper-recombinable and lies within FRA6E, the third most common fragile site in tumor tissue.
  • SIMILARITY: Contains 2 IBR-type zinc fingers.
  • SIMILARITY: Contains 2 RING-type zinc fingers.
  • SIMILARITY: Contains 1 ubiquitin-like domain.
  • CAUTION: Has been said to contain 2 RING fingers, but these are not found by any domain detection methods.
  • WEB RESOURCE: Name=GeneReviews; URL="http://www.genetests.org/query?gene=PARK2";.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AB009973; BAA25751.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF381282; AAM21457.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF381283; AAM21458.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF381286; AAM21461.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL445215; CAH73681.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL035697; CAH73681.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL132982; CAH73681.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP000886; CAH73681.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP000887; CAH73681.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP001576; CAH73681.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP001577; CAH73681.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP001578; CAH73681.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP003699; CAH73681.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL035697; CAI21385.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL132982; CAI21385.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL445215; CAI21385.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP000886; CAI21385.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP000887; CAI21385.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP001576; CAI21385.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP001577; CAI21385.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP001578; CAI21385.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP003699; CAI21385.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL132982; CAI23601.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL035697; CAI23601.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL445215; CAI23601.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP000886; CAI23601.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP000887; CAI23601.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP001576; CAI23601.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP001577; CAI23601.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP001578; CAI23601.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP003699; CAI23601.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC022014; AAH22014.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY564225; AAS88422.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_004553.2; -.
UniGene Hs.132954
3D structure databases
PDB
1IYF; NMR; -; A=1-76.[ExPASy / RCSB / EBI]
2JMO; NMR; -; A=307-384.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1IYF; -.
2JMO; -.
ModBase O60260.
Protein-protein interaction databases
IntAct O60260; -.
PTM databases
PhosphoSite O60260; -.
Organism-specific databases
H-InvDB HIX0023029; -.
HGNC HGNC:8607; PARK2.
GenAtlas PARK2.
HPA CAB016257; -.
MIM 168600; phenotype. [NCBI / EBI]
600116; phenotype. [NCBI / EBI]
602544; gene. [NCBI / EBI]
Orphanet 2828; Parkinson disease, genetic types.
PharmGKB PA32942; -.
GeneCards O60260.
Gene expression databases
ArrayExpress O60260; -.
CleanEx HS_PARK2; -.
GermOnline ENSG00000185345; Homo sapiens.
Ontolo