[1]
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NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM APP695).
TISSUE=Brain;
PubMed=2900758 [NCBI, ExPASy, EBI, Israel, Japan]
Shivers B.D.,
Hilbich C.,
Multhaup G.,
Salbaum J.M.,
Beyreuther K.,
Seeburg P.H.;
"Alzheimer's disease amyloidogenic glycoprotein: expression pattern in rat brain suggests a role in cell contact.";
EMBO J. 7:1365-1370(1988).
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[2]
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NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM APP770).
Feng J.,
Song S.,
Zheng J.;
"A new beta amyloid precursor protein cDNA found in Rat6 embryo fibroblasts.";
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases.
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[3]
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PROTEIN SEQUENCE OF 18-44.
PubMed=2968652 [NCBI, ExPASy, EBI, Israel, Japan]
Schubert D.,
Schroeder R.,
LaCorbiere M.,
Saitoh T.,
Cole G.;
"Amyloid beta protein precursor is possibly a heparan sulfate proteoglycan core protein.";
Science 241:223-226(1988).
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[4]
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PROTEIN SEQUENCE OF 18-32.
PubMed=1673681 [NCBI, ExPASy, EBI, Israel, Japan]
Potempska A.,
Styles J.,
Mehta P.,
Kim K.S.,
Miller D.L.;
"Purification and tissue level of the beta-amyloid peptide precursor of rat brain.";
J. Biol. Chem. 266:8464-8469(1991).
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[5]
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NUCLEOTIDE SEQUENCE [MRNA] OF 289-364.
TISSUE=Liver;
DOI=10.1093/nar/17.5.2130; PubMed=2648331 [NCBI, ExPASy, EBI, Israel, Japan]
Kang J.,
Mueller-Hill B.;
"The sequence of the two extra exons in rat preA4.";
Nucleic Acids Res. 17:2130-2130(1989).
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[6]
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PROTEIN SEQUENCE OF 720-730, AND MASS SPECTROMETRY.
DOI=10.1074/jbc.C100357200; PubMed=11483588 [NCBI, ExPASy, EBI, Israel, Japan]
Gu Y.,
Misonou H.,
Sato T.,
Dohmae N.,
Takio K.,
Ihara Y.;
"Distinct intramembrane cleavage of the beta-amyloid precursor protein family resembling gamma-secretase-like cleavage of Notch.";
J. Biol. Chem. 276:35235-35238(2001).
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[7]
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ALTERNATIVE SPLICING.
PubMed=8624099 [NCBI, ExPASy, EBI, Israel, Japan]
Sandbrink R.,
Masters C.L.,
Beyreuther K.;
"APP gene family. Alternative splicing generates functionally related isoforms.";
Ann. N. Y. Acad. Sci. 777:281-287(1996).
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[8]
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TISSUE SPECIFICITY OF APPICAN.
DOI=10.1074/jbc.270.20.11839; PubMed=7744833 [NCBI, ExPASy, EBI, Israel, Japan]
Shioi J.,
Pangalos M.N.,
Ripellino J.A.,
Vassilacopoulou D.,
Mytilineou C.,
Margolis R.U.,
Robakis N.K.;
"The Alzheimer amyloid precursor proteoglycan (appican) is present in brain and is produced by astrocytes but not by neurons in primary neural cultures.";
J. Biol. Chem. 270:11839-11844(1995).
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[9]
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TISSUE SPECIFICITY OF ISOFORMS.
PubMed=8996834 [NCBI, ExPASy, EBI, Israel, Japan]
Sandbrink R.,
Monning U.,
Masters C.L.,
Beyreuther K.;
"Expression of the APP gene family in brain cells, brain development and aging.";
Gerontology 43:119-131(1997).
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[10]
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INTERACTION WITH DDB1, AND MUTAGENESIS OF TYR-757; ASN-759 AND TYR-762.
PubMed=9930726 [NCBI, ExPASy, EBI, Israel, Japan]
Watanabe T.,
Sukegawa J.,
Tomita S.,
Iijima K.,
Oguchi S.,
Suzuki T.,
Nairn A.C.,
Greengard P.;
"A 127-kDa protein (UV-DDB) binds to the cytoplasmic domain of the Alzheimer's amyloid precursor protein.";
J. Neurochem. 72:549-556(1999).
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[11]
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INTERACTION WITH GNAO1, AND MUTAGENESIS OF 732-HIS-HIS-733.
PubMed=10024358 [NCBI, ExPASy, EBI, Israel, Japan]
Brouillet E.,
Trembleau A.,
Galanaud D.,
Volovitch M.,
Bouillot C.,
Valenza C.,
Prochiantz A.,
Allinquant B.;
"The amyloid precursor protein interacts with Go heterotrimeric protein within a cell compartment specialized in signal transduction.";
J. Neurosci. 19:1717-1727(1999).
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[12]
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COPPER-BINDING.
DOI=10.1016/0014-5793(94)00658-X; PubMed=7913895 [NCBI, ExPASy, EBI, Israel, Japan]
Hesse L.,
Beher D.,
Masters C.L.,
Multhaup G.;
"The beta A4 amyloid precursor protein binding to copper.";
FEBS Lett. 349:109-116(1994).
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[13]
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CHARACTERISTICS OF APPICAN, AND MUTAGENESIS OF SER-656.
DOI=10.1074/jbc.270.18.10388; PubMed=7737970 [NCBI, ExPASy, EBI, Israel, Japan]
Pangalos M.N.,
Efthimiopoulos S.,
Shioi J.,
Robakis N.K.;
"The chondroitin sulfate attachment site of appican is formed by splicing out exon 15 of the amyloid precursor gene.";
J. Biol. Chem. 270:10388-10391(1995).
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[14]
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BETA-AMYLOID METAL-BINDING.
DOI=10.1021/bi990438f; PubMed=10386999 [NCBI, ExPASy, EBI, Israel, Japan]
Huang X.,
Atwood C.S.,
Hartshorn M.A.,
Multhaup G.,
Goldstein L.E.,
Scarpa R.C.,
Cuajungco M.P.,
Gray D.N.,
Lim J.,
Moir R.D.,
Tanzi R.E.,
Bush A.I.;
"The A beta peptide of Alzheimer's disease directly produces hydrogen peroxide through metal ion reduction.";
Biochemistry 38:7609-7616(1999).
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[15]
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BETA-AMYLOID ZINC-BINDING.
DOI=10.1021/bi990205o; PubMed=10413512 [NCBI, ExPASy, EBI, Israel, Japan]
Liu S.T.,
Howlett G.,
Barrow C.J.;
"Histidine-13 is a crucial residue in the zinc ion-induced aggregation of the A beta peptide of Alzheimer's disease.";
Biochemistry 38:9373-9378(1999).
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[16]
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IMPORTANCE OF GLY-704 IN FREE RADICAL PROPAGATION, AND MUTAGENESIS OF GLY-704.
DOI=10.1016/S0925-4439(01)00097-7; PubMed=11959460 [NCBI, ExPASy, EBI, Israel, Japan]
Kanski J.,
Varadarajan S.,
Aksenova M.,
Butterfield D.A.;
"Role of glycine-33 and methionine-35 in Alzheimer's amyloid beta-peptide 1-42-associated oxidative stress and neurotoxicity.";
Biochim. Biophys. Acta 1586:190-198(2001).
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[17]
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PHOSPHORYLATION.
PubMed=9085254 [NCBI, ExPASy, EBI, Israel, Japan]
Oishi M.,
Nairn A.C.,
Czernik A.J.,
Lim G.S.,
Isohara T.,
Gandy S.E.,
Greengard P.,
Suzuki T.;
"The cytoplasmic domain of Alzheimer's amyloid precursor protein is phosphorylated at Thr654, Ser655, and Thr668 in adult rat brain and cultured cells.";
Mol. Med. 3:111-123(1997).
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[18]
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PHOSPHORYLATION AT SER-730.
DOI=10.1006/bbrc.1999.0637; PubMed=10329382 [NCBI, ExPASy, EBI, Israel, Japan]
Isohara T.,
Horiuchi A.,
Watanabe T.,
Ando K.,
Czernik A.J.,
Uno I.,
Greengard P.,
Nairn A.C.,
Suzuki T.;
"Phosphorylation of the cytoplasmic domain of Alzheimer's beta-amyloid precursor protein at Ser655 by a novel protein kinase.";
Biochem. Biophys. Res. Commun. 258:300-305(1999).
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[19]
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PHOSPHORYLATION, INDUCTION, SUBCELLULAR LOCATION, AND MUTAGENESIS OF THR-743.
PubMed=10341243 [NCBI, ExPASy, EBI, Israel, Japan]
Ando K.,
Oishi M.,
Takeda S.,
Iijima K.,
Isohara T.,
Nairn A.C.,
Kirino Y.,
Greengard P.,
Suzuki T.;
"Role of phosphorylation of Alzheimer's amyloid precursor protein during neuronal differentiation.";
J. Neurosci. 19:4421-4427(1999).
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[20]
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PHOSPHORYLATION AT THR-743.
PubMed=10936190 [NCBI, ExPASy, EBI, Israel, Japan]
Iijima K.,
Ando K.,
Takeda S.,
Satoh Y.,
Seki T.,
Itohara S.,
Greengard P.,
Kirino Y.,
Nairn A.C.,
Suzuki T.;
"Neuron-specific phosphorylation of Alzheimer's beta-amyloid precursor protein by cyclin-dependent kinase 5.";
J. Neurochem. 75:1085-1091(2000).
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[21]
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STRUCTURE OF CARBOHYDRATE IN APPICAN.
DOI=10.1074/jbc.M105818200; PubMed=11479316 [NCBI, ExPASy, EBI, Israel, Japan]
Tsuchida K.,
Shioi J.,
Yamada S.,
Boghosian G.,
Wu A.,
Cai H.,
Sugahara K.,
Robakis N.K.;
"Appican, the proteoglycan form of the amyloid precursor protein, contains chondroitin sulfate E in the repeating disaccharide region and 4-O-sulfated galactose in the linkage region.";
J. Biol. Chem. 276:37155-37160(2001).
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- FUNCTION: Functions as a cell surface receptor and performs physiological functions on the surface of neurons relevant to neurite growth, neuronal adhesion and axonogenesis. Involved in cell mobility and transcription regulation through protein-protein interactions (By similarity). Can promote transcription activation through binding to APBB1/Tip60 and inhibit Notch signaling through interaction with Numb (By similarity). Couples to apoptosis-inducing pathways such as those mediated by G(O) and JIP. Inhibits G(o) alpha ATPase activity. Acts as a kinesin I membrane receptor, mediating the axonal transport of beta-secretase and presenilin 1 (By similarity). May be involved in copper homeostasis/oxidative stress through copper ion reduction. Can regulate neurite outgrowth through binding to components of the extracellular matrix such as heparin and collagen I and IV (By similarity). The splice isoforms that contain the BPTI domain possess protease inhibitor activity (By similarity).
- FUNCTION: Beta-amyloid peptides are lipophilic metal chelators with metal-reducing activity. Bind transient metals such as copper, zinc and iron. Rat and mouse beta-amyloid peptides bind only weakly transient metals and have little reducing activity due to substitutions of transient metal chelating residues. Beta-APP42 may activate mononuclear phagocytes in the brain and elicit inflammatory responses. Promotes both tau aggregation and TPK II-mediated phosphorylation (By similarity).
- FUNCTION: Appicans elicit adhesion of neural cells to the extracellular matrix and may regulate neurite outgrowth in the brain.
- FUNCTION: The gamma-CTF peptides as well as the caspase-cleaved peptides, including C31, are potent enhancers of neuronal apoptosis (By similarity).
- SUBUNIT: Binds, via its C-terminus, to the PID domain of several cytoplasmic proteins, including APBB family members, the APBA family, MAPK8IP1, SHC1 and Numb and Dab1 (By similarity). Binding to Dab1 inhibits its serine phosphorylation (By similarity). Also interacts with GPCR-like protein BPP, FPRL1, APPBP1, IB1, KNS2 (via its TPR domains), APPBP2 (via BaSS) (By similarity) and DDB1. In vitro, it binds MAPT via the MT-binding domains (By similarity). Associates with microtubules in the presence of ATP and in a kinesin-dependent manner (By similarity). Interacts, through a C-terminal domain, with GNAO1. Amyloid beta-42 binds CHRNA7 in hippocampal neurons (By similarity). Beta-amyloid associates with HADH2 (By similarity). Interacts with CPEB1 and ANKS1B (By similarity).
- INTERACTION:
P46933:Apbb1; NbExp=1; IntAct=EBI-286155, EBI-286177;
O35827:Apbb3; NbExp=1; IntAct=EBI-286155, EBI-286163;
- SUBCELLULAR LOCATION: Membrane; Single-pass type I membrane protein. Membrane, clathrin-coated pit. Note=Cell surface protein that rapidly becomes internalized via clathrin-coated pits. During maturation, the immature APP (N-glycosylated in the endoplasmic reticulum) moves to the Golgi complex where complete maturation occurs (O-glycosylated and sulfated). After alpha-secretase cleavage, soluble APP is released into the extracellular space and the C-terminal is internalized to endosomes and lysosomes. Some APP accumulates in secretory transport vesicles leaving the late Golgi compartment and returns to the cell surface. Gamma-CTF(59) peptide is located to both the cytoplasm and nuclei of neurons. It can be translocated to the nucleus through association with Fe65 (By similarity). Beta-APP42 associates with FPRL1 at the cell surface and the complex is then rapidly internalized (By similarity). APP sorts to the basolateral surface in epithelial cells (By similarity). During neuronal differentiation, the Thr-743 phosphorylated form is located mainly in growth cones, moderately in neurites and sparingly in the cell body.
- ALTERNATIVE PRODUCTS:
8 named isoforms [FASTA] produced by alternative splicing.
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| Name | L-APP677 |
| Isoform ID | P08592-3 |
| Note: L-isoforms are referred to as appicans. |
| The sequence of this isoform is not described. |
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| Name | L-APP696 |
| Isoform ID | P08592-4 |
| Note: L-isoforms are referred to as appicans. |
| The sequence of this isoform is not described. |
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| Name | APP714 |
| Isoform ID | P08592-5 |
| The sequence of this isoform is not described. |
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| Name | L-APP733 |
| Isoform ID | P08592-6 |
| Note: L-isoforms are referred to as appicans. |
| The sequence of this isoform is not described. |
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| Name | APP751 |
| Isoform ID | P08592-7 |
| The sequence of this isoform is not described. |
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| Name | L-APP752 |
| Isoform ID | P08592-8 |
| Note: L-isoforms are referred to as appicans. |
| The sequence of this isoform is not described. |
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- TISSUE SPECIFICITY: In the brain, non-L-APP isoforms are expressed in neurons, isoform APP695 being the predominant form. In astrocytes and microglial cells, almost 50% is L-isoform (appican).
- DEVELOPMENTAL STAGE: From 6 days to 7 months, levels of KPI-containing isoforms increase in the brain cortex and hippocampus. Levels of L-APP increase in all brian regions during the same period, but levels are low compared to non-L-APP isoforms.
- INDUCTION: Phosphorylation of mature, glycosylated APP occurs 48-72 hours after treatment of neuronal cells with nerve growth factor which correlates with the timing of neurite outgrowth.
- DOMAIN: The basolateral sorting signal (BaSS) is required for sorting of membrane proteins to the basolateral surface of epithelial cells.
- DOMAIN: The NPXY sequence motif found in many tyrosine-phosphorylated proteins is required for the specific binding of the PID domain. However, additional amino acids either N- or C-terminal to the NPXY motif are often required for complete interaction. The PID domain-containing proteins which bind APP require the YENPTY motif for full interaction. These interactions are independent of phosphorylation on the terminal tyrosine residue. The NPXY site is also involved in clathrin-mediated endocytosis.
- PTM: Proteolytically processed under normal cellular conditions. Cleavage by alpha-secretase or alternatively by beta-secretase leads to generation and extracellular release of soluble APP peptides, S-APP-alpha and S-APP-beta, respectively, and the retention of corresponding membrane-anchored C-terminal fragments, C83 and C99. Subsequent processing of C83 by gamma-secretase yields P3 peptides. This is the major secretory pathway and is non-amyloidogenic. Alternatively, presenilin/nicastrin-mediated gamma-secretase processing of C99 releases the amyloid beta proteins, amyloid-beta 40 (Abeta40) and amyloid-beta 42 (Abeta42), major components of amyloid plaques, and the cytotoxic C-terminal fragments, gamma-CTF(50), gamma-CTF(57) and gamma-CTF(59).
- PTM: Proteolytically cleaved by caspases during neuronal apoptosis (By similarity). Cleavage at Asp-739 by either caspase-3, -8 or -9 results in the production of the neurotoxic C31 peptide and the increased production of beta-amyloid peptides (By similarity).
- PTM: N-glycosylated.
- PTM: O-glycosylated. O-linkage of chondroitin sulfate to the L-APP isoforms produces the APP proteoglycan core proteins, the appicans. The chondroitin sulfate chain of appicans contains 4-O-sulfated galactose in the linkage region and chondroitin sulfate E in the repeated disaccharide region.
- PTM: Phosphorylation in the C-terminal on tyrosine, threonine and serine residues is neuron-specific. Phosphorylation can affect APP processing, neuronal differentiation and interaction with other proteins. The Thr-743 phosphorylated form causes a conformational change which reduces binding of Fe65 family members. Phosphorylation on Tyr-757 is required for SHC binding. Phosphorylated in the extracellular domain by casein kinases on both soluble and membrane-bound APP. This phosphorylation is inhibited by heparin.
- PTM: Extracellular binding and reduction of copper, results in a corresponding oxidation of Cys-144 and Cys-158, and the formation of a disulfide bond (By similarity).
- MASS SPECTROMETRY: Mass=5911.3; Method=MALDI; Range=721-770; Source=PubMed:11483588;.
- MASS SPECTROMETRY: Mass=6024.4; Method=MALDI; Range=720-770; Source=PubMed:11483588;.
- MISCELLANEOUS: Chelation of metal ions, notably copper, iron and zinc, can induce histidine-bridging between beta-amyloid molecules resulting in beta-amyloid-metal aggregates. Rat and mouse beta-amyloid peptides have an arginine residue substituted for the bridging histidine residue and are thus less capable of forming amyloid aggegates. Extracellular zinc-binding increases binding of heparin to APP and inhibits collagen-binding (By similarity).
- SIMILARITY: Belongs to the APP family.
- SIMILARITY: Contains 1 BPTI/Kunitz inhibitor domain.
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