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HPI
The UniProtKB/Swiss-Prot Human Proteome Initiative |
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HPI Status report
UniProtKB/Swiss-Prot Release 57.15 of 02-Mar-10: 515203 entries
(Release statistics)
Total number of manually annotated mammalian entries in UniProtKB/Swiss-Prot: 64,838
Total number of manually annotated HUMAN entries in UniProtKB/Swiss-Prot: 20,265
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
14,464 |
34 |
0.71 |
7,527 |
37% |
| Variants (disease mutations and polymorphisms): |
62,195 |
1363 |
3.07 |
12,228 |
60% |
| Post-translational modifications (experimentally proven or potential): |
78,681 |
304 |
3.88 |
12,926 |
63% |
| References to published articles: |
132,555 / 49,720 |
183 |
6.54 |
20,151 |
99% |
| Comment blocks: |
117,365 / 43,310 |
36 |
5.79 |
19,698 |
97% |
| Feature lines: |
561,702 |
4286 |
27.72 |
20,265 |
100% |
| Cross-references: |
| EMBL protein_ids: |
150,943 / 149,926 |
723 |
7.45 |
20,143 |
99% |
| InterPro: |
60,141 / 7,798 |
24 |
2.97 |
17,294 |
85% |
| PDB (3D-structures): |
35,087 / 32,902 |
548 |
1.73 |
3,935 |
19% |
| MIM catalog of human genes and genetic disorders: |
15,806 / 14,912 |
15 |
0.78 |
12,440 |
61% |
| HGNC gene nomenclature: |
19,528 / 19,397 |
14 |
0.96 |
19,356 |
95% |
Total number of manually annotated MOUSE entries in UniProtKB/Swiss-Prot: 16,224
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
7,478 |
20 |
0.46 |
4,422 |
27% |
| Variants (disease mutations and polymorphisms): |
1,185 |
37 |
0.07 |
363 |
2% |
| Post-translational modifications (experimentally proven or potential): |
65,497 |
217 |
4.04 |
11,114 |
68% |
| References to published articles: |
54,898 / 18,810 |
50 |
3.38 |
16,100 |
99% |
| Comment blocks: |
85,177 / 34,804 |
22 |
5.25 |
15,910 |
98% |
| Feature lines: |
274,183 |
628 |
16.90 |
16,224 |
100% |
| Cross-references: |
| EMBL protein_ids: |
72,441 / 72,386 |
111 |
4.47 |
16,088 |
99% |
| InterPro: |
50,544 / 7,635 |
20 |
3.12 |
14,513 |
89% |
| PDB (3D-structures): |
5,704 / 5,296 |
302 |
0.35 |
1,002 |
6% |
| Mouse Genome Informatics: |
16,069 / 16,006 |
12 |
0.99 |
16,018 |
98% |
Total number of manually annotated RAT entries in UniProtKB/Swiss-Prot: 7,483
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
1,419 |
18 |
0.19 |
805 |
10% |
| Variants (disease mutations and polymorphisms): |
275 |
30 |
0.04 |
116 |
1% |
| Post-translational modifications (experimentally proven or potential): |
32,679 |
205 |
4.37 |
5,556 |
74% |
| References to published articles: |
15,866 / 9,699 |
30 |
2.12 |
7,063 |
94% |
| Comment blocks: |
39,612 / 19,096 |
26 |
5.29 |
7,372 |
98% |
| Feature lines: |
119,789 |
315 |
16.01 |
7,483 |
100% |
| Cross-references: |
| EMBL protein_ids: |
15,285 / 15,270 |
152 |
2.04 |
7,410 |
99% |
| InterPro: |
24,575 / 5,587 |
20 |
3.28 |
6,816 |
91% |
| PDB (3D-structures): |
3,267 / 3,111 |
164 |
0.44 |
437 |
5% |
| Rat Genome Database: |
7,364 / 7,346 |
3 |
0.98 |
7,360 |
98% |
For more detailed information about the taxonomic distribution of UniProtKB/Swiss-Prot
entries, see the corresponding section in the Release
statistics.
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