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HPI
The UniProtKB/Swiss-Prot Human Proteome Initiative |
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HPI Status report
UniProtKB/Swiss-Prot Release 55.3 of 29-Apr-2008: 366226 entries
(Release statistics)
Total number of manually annotated mammalian entries in UniProtKB/Swiss-Prot: 61,396
Total number of manually annotated HUMAN entries in UniProtKB/Swiss-Prot: 19,293
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
12,793 |
32 |
0.66 |
6,762 |
35% |
| Variants (disease mutations and polymorphisms): |
42,609 |
464 |
2.21 |
8,593 |
44% |
| Post-translational modifications (experimentally proven or potential): |
56,695 |
303 |
2.94 |
10,728 |
55% |
| References to published articles: |
97,103 / 43,422 |
165 |
5.03 |
19,076 |
98% |
| Comment blocks: |
106,053 / 39,086 |
32 |
5.50 |
18,659 |
96% |
| Feature lines: |
452,845 |
1429 |
23.47 |
19,293 |
100% |
| Cross-references: |
| EMBL protein_ids: |
123,044 / 122,714 |
723 |
6.38 |
19,162 |
99% |
| InterPro: |
47,464 / 6,421 |
23 |
2.46 |
16,269 |
84% |
| PDB (3D-structures): |
24,784 / 23,354 |
444 |
1.28 |
3,135 |
16% |
| MIM catalog of human genes and genetic disorders: |
14,949 / 14,081 |
15 |
0.77 |
11,938 |
61% |
| HGNC gene nomenclature: |
18,353 / 18,226 |
14 |
0.95 |
18,235 |
94% |
Total number of manually annotated MOUSE entries in UniProtKB/Swiss-Prot: 15,447
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
6,788 |
20 |
0.44 |
4,043 |
26% |
| Variants (disease mutations and polymorphisms): |
1,155 |
37 |
0.07 |
359 |
2% |
| Post-translational modifications (experimentally proven or potential): |
47,201 |
216 |
3.06 |
9,118 |
59% |
| References to published articles: |
44,842 / 16,764 |
49 |
2.90 |
15,221 |
98% |
| Comment blocks: |
76,931 / 30,766 |
22 |
4.98 |
15,076 |
97% |
| Feature lines: |
235,580 |
612 |
15.25 |
15,447 |
100% |
| Cross-references: |
| EMBL protein_ids: |
65,329 / 65,280 |
111 |
4.23 |
15,308 |
99% |
| InterPro: |
39,072 / 6,253 |
18 |
2.53 |
13,586 |
87% |
| PDB (3D-structures): |
4,142 / 3,882 |
182 |
0.27 |
800 |
5% |
| Mouse Genome Informatics: |
15,287 / 15,223 |
12 |
0.99 |
15,237 |
98% |
Total number of manually annotated RAT entries in UniProtKB/Swiss-Prot: 6,979
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
1,317 |
18 |
0.19 |
741 |
10% |
| Variants (disease mutations and polymorphisms): |
237 |
12 |
0.03 |
112 |
1% |
| Post-translational modifications (experimentally proven or potential): |
24,223 |
204 |
3.47 |
4,624 |
66% |
| References to published articles: |
14,575 / 9,116 |
25 |
2.09 |
6,561 |
94% |
| Comment blocks: |
35,629 / 17,033 |
24 |
5.11 |
6,843 |
98% |
| Feature lines: |
102,164 |
314 |
14.64 |
6,979 |
100% |
| Cross-references: |
| EMBL protein_ids: |
14,290 / 14,277 |
152 |
2.05 |
6,904 |
98% |
| InterPro: |
18,625 / 4,545 |
17 |
2.67 |
6,314 |
90% |
| PDB (3D-structures): |
2,528 / 2,413 |
114 |
0.36 |
380 |
5% |
| Rat Genome Database: |
6,856 / 6,837 |
3 |
0.98 |
6,851 |
98% |
For more detailed information about the taxonomic distribution of UniProtKB/Swiss-Prot
entries, see the corresponding section in the Release
statistics.
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