Species code:	SYNY3
Taxonomy:	Bacteria; Cyanobacteria; Chroococcales; Synechocystis (TaxID: 1148) [NEWT/ NCBI]
Description:	Cyanobacterium that carries a complete set of genes for oxygenic photosynthesis.
Properties:	Presence of flagella: No Interaction: No Number of membranes: 2 Number of inteins: 4 in 4 different sequences
Statistics:	Number of SYNY3 entries in the UniProt Knowledgebase: 3506 (1009 in UniProtKB/Swiss-Prot + 2497 in UniProtKB/TrEMBL)

Genome structure:	• Chromosome EMBL accession number BA000022 (circular; 3,573,470 bp) (download entry) (download Genome Reviews). • Plasmid pSYSM EMBL accession number AP004310 (circular; 119,895 bp) (download entry) (download Genome Reviews). • Plasmid pSYSA EMBL accession number AP004311 (circular; 103,307 bp) (download entry) (download Genome Reviews). • Plasmid pSYSG EMBL accession number AP004312 (circular; 44,343 bp) (download entry) (download Genome Reviews). • Plasmid pSYSX EMBL accession number AP006585 (circular; 106,004 bp) (download entry) (download Genome Reviews).
Reference(s):	[1] MEDLINE=97061201; PubMed=8905231; [ NCBI , EBI , Israel , Japan ] Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S. ; "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."; DNA Res. 3:109-136(1996). [2] MEDLINE=96127529; PubMed=8590279; [ NCBI , EBI , Israel , Japan ] Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S. ; "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."; DNA Res. 2:153-166(1995). [3] PubMed=14686584; [ NCBI , EBI , Israel , Japan ] Kaneko T., Nakamura Y., Sasamoto S., Watanabe A., Kohara M., Matsumoto M., Shimpo S., Yamada M., Tabata S. ; "Structural analysis of four large plasmids harboring in a unicellular cyanobacterium, Synechocystis sp. PCC 6803."; DNA Res. 10:221-228(2003).
Web links:	Official genome site(s): http://bacteria.kazusa.or.jp/cyanobase/Synechocystis/index.html Other web sites: CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Synechocystis&GLspecies=PCC6803&GLstrain=Strain Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid1148%5Borgn%5D GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Syne_PCC6803 Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Synechocystis.html PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p60_Syn_PCC68 TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntss01  EBI Proteome Analysis page  UniProtKB/Swiss-Prot document

• Genome Proximity Viewer: This program displays the genes that are found in the genomic environment of a selected locus.
  
  
• Perform a BLAST search against all proteins from this proteome
  
  
• Download a file by FTP containing all UniProt Knowledgebase entries of this proteome
  • in UniProt Knowledgebase format
  • in FASTA format
  
  
• Retrieve set of characterized or identified proteins for this proteome
  
  
• Retrieve set of proteins with 3D structure for this proteome