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HAMAP: Serratia proteamaculans (strain 568) complete proteome

General information

Species:  Serratia proteamaculans (strain 568)
Species code: SERP5
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia (TaxID: 399741) [NEWT/ NCBI]
Description: Serratia proteamaculans 568, an Enterobacteriaceae, was isolated as a root endophyte from Populus trichocarpa. S.proteamaculans has been found promote plant growth, and it has been demonstrated that this occurs via the production of specific compounds, such as lipo-chitin oligosaccharides, which are used as specific bacteria-to-plant signals. Individual plant growth promoting bacteria produce specific structurally diverse LCO mixtures. Endophytes are bacteria that live within the tissue of a plant without substantively harming it. They can help promote plant growth in several ways, including helping the host overcome toxic effects of environmental pollution.
Properties: Presence of flagella: Yes?
Human pathogen: No
Interaction: Plant endophyte
Number of membranes: 2
Number of inteins:0
Statistics: Number of SERP5 entries in the UniProt Knowledgebase: 4930 (653 in UniProtKB/Swiss-Prot + 4277 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    568
Genome structure:
• Chromosome EMBL accession number CP000826 (circular; 5,448,853 bp) (download entry) (download Genome Reviews).
• Plasmid pSPRO01 EMBL accession number CP000827 (circular; 46,804 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Taghavi S., Newman L., Vangronsveld J., van der Lelie D., Richardson P. ;
"Complete sequence of chromosome of Serratia proteamaculans 568.";
Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases.
[2] Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Taghavi S., Newman L., Vangronsveld J., van der Lelie D., Richardson P. ;
"Complete sequence of plasmid of Serratia proteamaculans 568.";
Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/serpr/serpr.home.html
Other web sites:
coliBASE: http://xbase.bham.ac.uk/colibase/genome.pl?id=1691
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=17459
ERIC: http://www.ericbrc.org/portal/eric/serratiaproteamaculans568v2
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Spro_568
 EBI Proteome Analysis page



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