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HAMAP: Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) complete proteome

General information

Species:  Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Species code: RHORT
Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum (TaxID: 269796) [NEWT/ NCBI]
Description: Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) is a Gram-negative, motile and spiral-shaped bacterium. It is able to grow under a broad range of conditions including aerobiosis and anaerobiosis. It can use fermentation or photosynthesis for producing energy when it grows anaerobically. It is able to grow on CO as sole source of energy. Its nitrogen fixation system consists of both a Mo-Fe and a Fe-only nitrogenases.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of RHORT entries in the UniProt Knowledgebase: 3839 (358 in UniProtKB/Swiss-Prot + 3481 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 11170 / NCIB 8255
Genome structure:
• Chromosome EMBL accession number CP000230 (circular; 4,352,825 bp) (download entry) (download Genome Reviews).
• Plasmid pRHORT EMBL accession number CP000231 (circular; 53,732 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P., Zhang Y., Roberts G., Reslewic S., Zhou S., Schwartz D.C. ;
"Complete sequence of the chromosome of Rhodospirillum rubrum ATCC 11170.";
Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases.
[2] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P., Zhang Y., Roberts G., Reslewic S., Zhou S., Schwartz D.C. ;
"Complete sequence of plasmid of Rhodospirillum rubrum ATCC 11170.";
Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/rhoru/rhoru.home.html
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Rhodospirillum&GLspecies=rubrum&GLstrain=ATCC11170
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid269796%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Rrub_ATCC11170
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p58_Rho_rubru
 EBI Proteome Analysis page



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