ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
Search for

HAMAP: Clostridium acetobutylicum complete proteome

General information

Species:  Clostridium acetobutylicum
Species code: CLOAB
Taxonomy: Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium (TaxID: 1488) [NEWT/ NCBI]
Description: Gram-positive, rod-shaped anaerobe bacterium. Isolates of C.acetobutylicum were first identified between 1912 and 1914, and these were used to develop an industrial starch-based acetone, butanol and ethanol (ABE) fermentation process, to produce acetone for gunpowder production, by Chaim Weizmann during World War I. The type strain ATCC 824 was isolated in 1924 from garden soil in Connecticut and is one of the best-studied clostridia. The plasmid pSOL1 carries the genes involved in solvent formation.
Properties: Presence of flagella: Yes
Interaction: No
Number of membranes: 1
Number of inteins:0
Statistics: Number of CLOAB entries in the UniProt Knowledgebase: 3847 (528 in UniProtKB/Swiss-Prot + 3319 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787
Genome structure:
• Chromosome EMBL accession number AE001437 (circular; 3,940,880 bp) (download entry) (download Genome Reviews).
• Plasmid pSOL1 EMBL accession number AE001438 (circular; 192,000 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=21359325; PubMed=11466286; [ NCBI , EBI , Israel , Japan ]
Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R., Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F., Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V., Smith D.R. ;
"Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum.";
J. Bacteriol. 183:4823-4838(2001).
Web links:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Clostridium&GLspecies=acetobutylicum&GLstrain=ATCC824
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid272562%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Cace_ATCC824
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Clostridium_acetobutylicum.html
Pathema: http://pathema.jcvi.org/tigr-scripts/Clostridium/shared/GenomePage.cgi?org=ntca01
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p77_Clo_aceto
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntca01
 EBI Proteome Analysis page



Tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
 Hosted by ca flag CBR Canada Mirror sites: Australia  Brazil  China  Korea  Switzerland
Search for