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PROSITE entry PS01283


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General information about the entry

Entry name [info] TBOX_1
Accession [info] PS01283
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
24-JAN-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00972

Name and characterization of the entry

Description [info] T-box domain signature 1.
Pattern [info]
[LQI]-W-x(2)-[FCL]-x(3,4)-[NT]-E-[MQ]-[LIVNM]-[LIV]-[TLF]-x(2)-[GR]-[RG]-
[KRQM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_01 which contains 570'830 sequence entries.


Total number of hits 93 in 93 different sequences
Number of true positive hits 93 in 93 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 89.42 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
93 sequences

BRC2_HALRO  (O01409), BYN_DROME   (P55965), EOMES_HUMAN (O95936), 
EOMES_MOUSE (O54839), EOMES_XENLA (P79944), H15_DROME   (Q94890), 
OMB_DROME   (Q24432), TBR1_HUMAN  (Q16650), TBR1_MOUSE  (Q64336), 
TBR1_PATPE  (Q9NL40), TBX10_HUMAN (O75333), TBX10_MOUSE (Q810F8), 
TBX11_CAEEL (Q20257), TBX12_CAEEL (P90971), TBX15_HUMAN (Q96SF7), 
TBX15_MOUSE (O70306), TBX18_CAEEL (O02073), TBX18_HUMAN (O95935), 
TBX18_MOUSE (Q9EPZ6), TBX19_CANLF (Q5XNS0), TBX19_CHICK (P79778), 
TBX19_HUMAN (O60806), TBX19_MOUSE (Q99ME7), TBX1A_XENLA (Q8AX98), 
TBX1B_XENLA (Q32NI9), TBX1_CAEEL  (O17212), TBX1_DANRE  (Q8AXX2), 
TBX1_HUMAN  (O43435), TBX1_MOUSE  (P70323), TBX1_XENTR  (Q3SA49), 
TBX20_CHICK (Q8UW76), TBX20_DANRE (Q9I9K7), TBX20_HUMAN (Q9UMR3), 
TBX20_MOUSE (Q9ES03), TBX20_XENLA (Q8AXW8), TBX20_XENTR (Q3SA46), 
TBX21_HUMAN (Q9UL17), TBX21_MOUSE (Q9JKD8), TBX22_HUMAN (Q9Y458), 
TBX22_MOUSE (Q8K402), TBX2A_XENLA (Q9IBC8), TBX2B_XENLA (Q6PCL0), 
TBX2_CAEEL  (Q19691), TBX2_CANLF  (Q863A2), TBX2_DANRE  (Q7ZTU9), 
TBX2_HUMAN  (Q13207), TBX2_MOUSE  (Q60707), TBX2_XENTR  (Q3SA48), 
TBX33_CAEEL (O45291), TBX37_CAEEL (Q9U2C9), TBX38_CAEEL (Q9XVD5), 
TBX3_CHICK  (O73718), TBX3_HUMAN  (O15119), TBX3_MOUSE  (P70324), 
TBX3_RAT(Q7TST9), TBX4_CANLF  (Q861Q9), TBX4_HUMAN  (P57082), 
TBX4_MOUSE  (P70325), TBX5A_DANRE (Q9IAK8), TBX5_CHICK  (Q9PWE8), 
TBX5_HUMAN  (Q99593), TBX5_MOUSE  (P70326), TBX5_RAT(Q5I2P1), 
TBX5_XENLA  (Q9W7C2), TBX5_XENTR  (Q3SA47), TBX6L_CHICK (P79779), 
TBX6L_DANRE (P79742), TBX6_BOVIN  (E1BEA8), TBX6_DANRE  (Q8JIS6), 
TBX6_GORGO  (A1YF56), TBX6_HUMAN  (O95947), TBX6_MOUSE  (P70327), 
TBX6_RAT(D3ZJK7), TBX6_XENLA  (Q8AV66), TBX6_XENTR  (Q66JL1), 
TBX7_CAEEL  (Q95PX3), TBX8_CAEEL  (Q22292), TBX9_CAEEL  (Q22289), 
TBXT1_BRAFL (Q17134), TBXT2_BRAFL (P80492), TBXTA_DANRE (Q07998), 
TBXT_CANLF  (Q9GL27), TBXT_CHICK  (P79777), TBXT_HALRO  (P56158), 
TBXT_HEMPU  (Q25113), TBXT_HUMAN  (O15178), TBXT_MOUSE  (P20293), 
TBXT_PATPE  (Q9U903), TBXT_XENLA  (P24781), VEGTA_XENLA (P87377), 
VEGTB_XENLA (O13161), VEGT_XENBO  (Q98UD2), VEGT_XENTR  (Q28HY0)
» more

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

MGAP_HUMAN  (Q8IWI9), MGAP_MOUSE  (A2AWL7), TBX30_CAEEL (Q9N2K7), 
TBX31_CAEEL (Q9TZL0), TBX32_CAEEL (O61764), TBX34_CAEEL (Q9NAH2), 
TBX35_CAEEL (Q09376), TBX36_CAEEL (Q23622), TBX39_CAEEL (Q9NA56), 
TBX40_CAEEL (Q9NA55), TBX41_CAEEL (Q22813)
» more

PDB
[Detailed view]
62 PDB

1H6F; 1XBR; 2X6U; 2X6V; 4A04; 4S0H; 5BQD; 5FLV; 5QRF; 5QRG; 5QRH; 5QRI; 5QRJ; 5QRK; 5QRL; 5QRM; 5QRN; 5QRO; 5QRP; 5QRQ; 5QRR; 5QRS; 5QRT; 5QRU; 5QRV; 5QRW; 5QRX; 5QRY; 5QRZ; 5QS0; 5QS1; 5QS2; 5QS3; 5QS4; 5QS5; 5QS6; 5QS7; 5QS8; 5QS9; 5QSA; 5QSB; 5QSC; 5QSD; 5QSE; 5QSF; 5QSG; 5QSH; 5QSI; 5QSJ; 5QSK; 5QSL; 5QT0; 5T1J; 6F58; 6F59; 6ZU8; 7ZK2; 7ZKF; 7ZL2; 8A10; 8A7N; 8CDN
» more